Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Gene families : OG_02_0044967 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040478 | |
Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000070 | mitotic sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000154 | rRNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000451 | rRNA 2'-O-methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000470 | maturation of LSU-rRNA | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000494 | box C/D RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000786 | nucleosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000794 | condensed nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000819 | sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0001094 | TFIID-class transcription factor complex binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0001651 | dense fibrillar component | IEP | Predict GO terms from Neighborhoods |
CC | GO:0001652 | granular component | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001831 | trophectodermal cellular morphogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001835 | blastocyst hatching | IEP | Predict GO terms from Neighborhoods |
MF | GO:0002039 | p53 binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002181 | cytoplasmic translation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002761 | regulation of myeloid leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002762 | negative regulation of myeloid leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0003360 | brainstem development | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predict GO terms from Neighborhoods |
MF | GO:0005112 | Notch binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005791 | rough endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005827 | polar microtubule | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006356 | regulation of transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006403 | RNA localization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006901 | vesicle coating | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007000 | nucleolus organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007080 | mitotic metaphase plate congression | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007229 | integrin-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007369 | gastrulation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008097 | 5S rRNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009819 | drought recovery | IEP | Predict GO terms from Neighborhoods |
CC | GO:0009930 | longitudinal side of cell surface | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010215 | cellulose microfibril organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010390 | histone monoubiquitination | IEP | Predict GO terms from Neighborhoods |
CC | GO:0015030 | Cajal body | IEP | Predict GO terms from Neighborhoods |
CC | GO:0015934 | large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016055 | Wnt signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016074 | sno(s)RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016574 | histone ubiquitination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0017004 | cytochrome complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0017126 | nucleologenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0017145 | stem cell division | IEP | Predict GO terms from Neighborhoods |
BP | GO:0018364 | peptidyl-glutamine methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0022612 | gland morphogenesis | IEP | Predict GO terms from Neighborhoods |
CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030218 | erythrocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030330 | DNA damage response, signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030332 | cyclin binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030515 | snoRNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030516 | regulation of axon extension | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030852 | regulation of granulocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030853 | negative regulation of granulocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031126 | sno(s)RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031145 | anaphase-promoting complex-dependent catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031167 | rRNA methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0031208 | POZ domain binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0031428 | box C/D RNP complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0031463 | Cul3-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0031464 | Cul4A-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0031465 | Cul4B-RING E3 ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0031514 | motile cilium | IEP | Predict GO terms from Neighborhoods |
CC | GO:0031672 | A band | IEP | Predict GO terms from Neighborhoods |
CC | GO:0032040 | small-subunit processome | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032467 | positive regulation of cytokinesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033522 | histone H2A ubiquitination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033967 | box C/D RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034406 | cell wall beta-glucan metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034410 | cell wall beta-glucan biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034644 | cellular response to UV | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034963 | box C/D RNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035019 | somatic stem cell population maintenance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035023 | regulation of Rho protein signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035024 | negative regulation of Rho protein signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035188 | hatching | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035518 | histone H2A monoubiquitination | IEP | Predict GO terms from Neighborhoods |
MF | GO:0036009 | protein-glutamine N-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
CC | GO:0036126 | sperm flagellum | IEP | Predict GO terms from Neighborhoods |
BP | GO:0040016 | embryonic cleavage | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043124 | negative regulation of I-kappaB kinase/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043144 | sno(s)RNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043628 | small regulatory ncRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044085 | cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
MF | GO:0044325 | transmembrane transporter binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044346 | fibroblast apoptotic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0044391 | ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predict GO terms from Neighborhoods |
CC | GO:0045111 | intermediate filament cytoskeleton | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045638 | negative regulation of myeloid cell differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045773 | positive regulation of axon extension | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045840 | positive regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045842 | positive regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
BP | GO:0046580 | negative regulation of Ras protein signal transduction | IEP | Predict GO terms from Neighborhoods |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048208 | COPII vesicle coating | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048254 | snoRNA localization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050772 | positive regulation of axonogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051058 | negative regulation of small GTPase mediated signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051310 | metaphase plate congression | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0052324 | plant-type cell wall cellulose biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0052541 | plant-type cell wall cellulose metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070555 | response to interleukin-1 | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070914 | UV-damage excision repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071347 | cellular response to interleukin-1 | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071478 | cellular response to radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071482 | cellular response to light stimulus | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071493 | cellular response to UV-B | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071629 | cytoplasm protein quality control by the ubiquitin-proteasome system | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071630 | nuclear protein quality control by the ubiquitin-proteasome system | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071684 | organism emergence from protective structure | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071985 | multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072331 | signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072576 | liver morphogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090351 | seedling development | IEP | Predict GO terms from Neighborhoods |
CC | GO:0097729 | 9+2 motile cilium | IEP | Predict GO terms from Neighborhoods |
CC | GO:0098552 | side of membrane | IEP | Predict GO terms from Neighborhoods |
BP | GO:0098813 | nuclear chromosome segregation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predict GO terms from Neighborhoods |
BP | GO:0140455 | cytoplasm protein quality control | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900087 | positive regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901970 | positive regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901976 | regulation of cell cycle checkpoint | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902101 | positive regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902105 | regulation of leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902106 | negative regulation of leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902532 | negative regulation of intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902808 | positive regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903707 | negative regulation of hemopoiesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904526 | regulation of microtubule binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905114 | cell surface receptor signaling pathway involved in cell-cell signaling | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905820 | positive regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1990258 | histone glutamine methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:1990259 | histone-glutamine methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000001 | regulation of DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000819 | regulation of nucleotide-excision repair | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |