Predict GO terms from Neighborhoods
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  5. SOLTUB.AGRIA.G00000040632

SOLTUB.AGRIA.G00000040632


Description : Transposon-like ORF


Gene families : OG_02_0014209 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040632
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_3


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009694 jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009696 salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009863 salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0016139 glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0018958 phenol-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035834 indole alkaloid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046593 mandelonitrile lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0050529 polyneuridine-aldehyde esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080031 methyl salicylate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080032 methyl jasmonate esterase activity IEP Predict GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029480 Transpos_assoc 4 39
No external refs found!