| CC | GO:0000427 | plastid-encoded plastid RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001887 | selenium compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004127 | cytidylate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004526 | ribonuclease P activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004550 | nucleoside diphosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004659 | prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004750 | D-ribulose-phosphate 3-epimerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005622 | intracellular anatomical structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005997 | xylulose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005998 | xylulose catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006775 | fat-soluble vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008198 | ferrous iron binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008887 | glycerate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008974 | phosphoribulokinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009000 | selenocysteine lyase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009271 | phage shock | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009399 | nitrogen fixation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009508 | plastid chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009528 | plastid inner membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009534 | chloroplast thylakoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009535 | chloroplast thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009575 | chromoplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009657 | plastid organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009658 | chloroplast organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009668 | plastid membrane organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009706 | chloroplast inner membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009842 | cyanelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010007 | magnesium chelatase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010027 | thylakoid membrane organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010176 | homogentisate phytyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010189 | vitamin E biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010236 | plastoquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010269 | response to selenium ion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010287 | plastoglobule | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010297 | heteropolysaccharide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010304 | PSII associated light-harvesting complex II catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010319 | stromule | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010354 | homogentisate prenyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010566 | regulation of ketone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010795 | regulation of ubiquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016673 | oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016783 | sulfurtransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016791 | phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018282 | metal incorporation into metallo-sulfur cluster | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018283 | iron incorporation into metallo-sulfur cluster | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019253 | reductive pentose-phosphate cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019321 | pentose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019323 | pentose catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019374 | galactolipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019375 | galactolipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019685 | photosynthesis, dark reaction | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019866 | organelle inner membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031071 | cysteine desulfurase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031090 | organelle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031676 | plasma membrane-derived thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031967 | organelle envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031969 | chloroplast membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031975 | envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031976 | plastid thylakoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031977 | thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032544 | plastid translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032790 | ribosome disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034256 | chlorophyll(ide) b reductase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035970 | peptidyl-threonine dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042170 | plastid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042360 | vitamin E metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042362 | fat-soluble vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042651 | thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042717 | plasma membrane-derived chromatophore membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043144 | sno(s)RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046408 | chlorophyll synthetase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046940 | nucleoside monophosphate phosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047538 | 2-carboxy-D-arabinitol-1-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048564 | photosystem I assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051741 | 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051742 | 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055035 | plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061635 | regulation of protein complex stability | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097009 | energy homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097428 | protein maturation by iron-sulfur cluster transfer | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098572 | stromal side of plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098586 | cellular response to virus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098807 | chloroplast thylakoid membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102550 | 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102661 | homogentisate solanyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0103012 | ferredoxin-thioredoxin reductase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predict GO terms from Neighborhoods |