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  5. SOLTUB.AGRIA.G00000041147

SOLTUB.AGRIA.G00000041147


Description : Disease resistance protein (CC-NBS-LRR class) family


Gene families : OG_02_0000993 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041147
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_223


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006952 defense response IEA AHRD
BP GO:0009617 response to bacterium IEA AHRD
CC GO:0016020 membrane IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
MF GO:0005242 inward rectifier potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005244 voltage-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005249 voltage-gated potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005261 cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005267 potassium channel activity IEP Predict GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
BP GO:0009644 response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010222 stem vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010229 inflorescence development IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015276 ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022843 voltage-gated cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:0042391 regulation of membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0080006 internode patterning IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0098659 inorganic cation import across plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0099094 ligand-gated cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:0099587 inorganic ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1990573 potassium ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 158 392
IPR027417 P-loop_NTPase 142 406
No external refs found!