SOLTUB.AGRIA.G00000041528

Description : tetratricopeptide repeat (TPR)-containing protein

Gene families : OG_02_0021323 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041528
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_35

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006457	protein folding	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	IEA	AHRD
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0019898	extrinsic component of membrane	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
MF	GO:0031072	heat shock protein binding	IEA	AHRD
CC	GO:0031312	extrinsic component of organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0033993	response to lipid	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	IEA	AHRD
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061077	chaperone-mediated protein folding	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	IEA	AHRD
CC	GO:0098850	extrinsic component of synaptic vesicle membrane	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901700	response to oxygen-containing compound	IEA	AHRD
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0004124	cysteine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004142	diacylglycerol cholinephosphotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005242	inward rectifier potassium channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005249	voltage-gated potassium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predict GO terms from Neighborhoods
BP	GO:0010289	homogalacturonan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010394	homogalacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015271	outward rectifier potassium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015690	aluminum cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016458	obsolete gene silencing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0017169	CDP-alcohol phosphatidyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019344	cysteine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019499	cyanide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0022843	voltage-gated cation channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030900	forebrain development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031061	negative regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032452	histone demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032453	histone H3-methyl-lysine-4 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045639	positive regulation of myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045646	regulation of erythrocyte differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050017	L-3-cyanoalanine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0062150	amorpha-4,11-diene 12-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140457	protein demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901797	negative regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1905269	positive regulation of chromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:2000177	regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000179	positive regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011990	TPR-like_helical_dom_sf	311	428
IPR011990	TPR-like_helical_dom_sf	171	345
IPR019734	TPR_repeat	241	265

External Links

No external refs found!

SOLTUB.AGRIA.G00000041528

Expression Profile

Co-expression Networks

Functional Annotation