SOLTUB.AGRIA.G00000041763

Description : Calcium-binding EF-hand

Gene families : OG_02_0001031 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041763
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_142

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEA	AHRD
MF	GO:0000166	nucleotide binding	IEA	AHRD
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0001664	G protein-coupled receptor binding	None	Extended
BP	GO:0001666	response to hypoxia	None	Extended
BP	GO:0003008	system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	AHRD
MF	GO:0004674	protein serine/threonine kinase activity	IEA	AHRD
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEA	AHRD
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005246	calcium channel regulator activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	AHRD
MF	GO:0005515	protein binding	IEA	AHRD
MF	GO:0005516	calmodulin binding	IEA	AHRD
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IEA	AHRD
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005794	Golgi apparatus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005856	cytoskeleton	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006468	protein phosphorylation	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	IEA	AHRD
BP	GO:0007600	sensory perception	None	Extended
BP	GO:0007601	visual perception	IEA	AHRD
BP	GO:0007602	phototransduction	IEA	AHRD
BP	GO:0007605	sensory perception of sound	IEA	AHRD
MF	GO:0008139	nuclear localization sequence binding	IEA	AHRD
BP	GO:0008150	biological_process	IEA	AHRD
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008594	photoreceptor cell morphogenesis	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009581	detection of external stimulus	None	Extended
BP	GO:0009582	detection of abiotic stimulus	None	Extended
BP	GO:0009583	detection of light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
CC	GO:0009898	cytoplasmic side of plasma membrane	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010649	regulation of cell communication by electrical coupling	None	Extended
BP	GO:0010651	negative regulation of cell communication by electrical coupling	IEA	AHRD
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
BP	GO:0010959	regulation of metal ion transport	None	Extended
CC	GO:0012505	endomembrane system	IEA	AHRD
CC	GO:0014069	postsynaptic density	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
CC	GO:0016021	integral component of membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016247	channel regulator activity	None	Extended
MF	GO:0016301	kinase activity	IEA	AHRD
BP	GO:0016310	phosphorylation	IEA	AHRD
MF	GO:0016740	transferase activity	IEA	AHRD
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018105	peptidyl-serine phosphorylation	IEA	AHRD
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018209	peptidyl-serine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019904	protein domain specific binding	IEA	AHRD
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022898	regulation of transmembrane transporter activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0030054	cell junction	IEA	AHRD
CC	GO:0030141	secretory granule	IEA	AHRD
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030182	neuron differentiation	None	Extended
CC	GO:0030424	axon	IEA	AHRD
CC	GO:0030425	dendrite	IEA	AHRD
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
CC	GO:0031301	integral component of organelle membrane	None	Extended
CC	GO:0031302	intrinsic component of endosome membrane	None	Extended
CC	GO:0031303	integral component of endosome membrane	IEA	AHRD
CC	GO:0031410	cytoplasmic vesicle	None	Extended
MF	GO:0031800	type 3 metabotropic glutamate receptor binding	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032386	regulation of intracellular transport	None	Extended
BP	GO:0032387	negative regulation of intracellular transport	None	Extended
BP	GO:0032409	regulation of transporter activity	None	Extended
BP	GO:0032410	negative regulation of transporter activity	None	Extended
BP	GO:0032412	regulation of ion transmembrane transporter activity	None	Extended
BP	GO:0032413	negative regulation of ion transmembrane transporter activity	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
CC	GO:0032991	protein-containing complex	IEA	AHRD
BP	GO:0033157	regulation of intracellular protein transport	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034330	cell junction organization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034763	negative regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0034766	negative regulation of ion transmembrane transport	None	Extended
MF	GO:0035254	glutamate receptor binding	None	Extended
MF	GO:0035256	G protein-coupled glutamate receptor binding	None	Extended
BP	GO:0035556	intracellular signal transduction	IEA	AHRD
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042277	peptide binding	None	Extended
BP	GO:0042306	regulation of protein import into nucleus	None	Extended
BP	GO:0042308	negative regulation of protein import into nucleus	IEA	AHRD
BP	GO:0042461	photoreceptor cell development	None	Extended
BP	GO:0042462	eye photoreceptor cell development	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
CC	GO:0042995	cell projection	IEA	AHRD
CC	GO:0043005	neuron projection	None	Extended
CC	GO:0043025	neuronal cell body	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043195	terminal bouton	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043271	negative regulation of ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044280	subplasmalemmal coating	IEA	AHRD
CC	GO:0044297	cell body	None	Extended
MF	GO:0044325	transmembrane transporter binding	IEA	AHRD
CC	GO:0045202	synapse	IEA	AHRD
BP	GO:0046549	retinal cone cell development	IEA	AHRD
BP	GO:0046777	protein autophosphorylation	IEA	AHRD
BP	GO:0046822	regulation of nucleocytoplasmic transport	None	Extended
BP	GO:0046823	negative regulation of nucleocytoplasmic transport	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048167	regulation of synaptic plasticity	IEA	AHRD
MF	GO:0048306	calcium-dependent protein binding	IEA	AHRD
BP	GO:0048468	cell development	None	Extended
CC	GO:0048471	perinuclear region of cytoplasm	IEA	AHRD
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048666	neuron development	None	Extended
BP	GO:0048667	cell morphogenesis involved in neuron differentiation	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050804	modulation of chemical synaptic transmission	None	Extended
BP	GO:0050808	synapse organization	None	Extended
BP	GO:0050877	nervous system process	None	Extended
BP	GO:0050896	response to stimulus	IEA	AHRD
BP	GO:0050953	sensory perception of light stimulus	None	Extended
BP	GO:0050954	sensory perception of mechanical stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051051	negative regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051223	regulation of protein transport	None	Extended
BP	GO:0051224	negative regulation of protein transport	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051924	regulation of calcium ion transport	None	Extended
BP	GO:0051926	negative regulation of calcium ion transport	None	Extended
BP	GO:0060040	retinal bipolar neuron differentiation	IEA	AHRD
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070201	regulation of establishment of protein localization	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IEA	AHRD
BP	GO:0090317	negative regulation of intracellular protein transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098552	side of membrane	None	Extended
CC	GO:0098562	cytoplasmic side of membrane	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0098793	presynapse	IEA	AHRD
BP	GO:0098885	modification of postsynaptic actin cytoskeleton	IEA	AHRD
BP	GO:0098926	postsynaptic signal transduction	None	Extended
CC	GO:0098978	glutamatergic synapse	IEA	AHRD
BP	GO:0099010	modification of postsynaptic structure	None	Extended
MF	GO:0099106	ion channel regulator activity	None	Extended
BP	GO:0099177	regulation of trans-synaptic signaling	None	Extended
CC	GO:0099503	secretory vesicle	None	Extended
BP	GO:0099527	postsynapse to nucleus signaling pathway	IEA	AHRD
BP	GO:0099563	modification of synaptic structure	None	Extended
CC	GO:0099572	postsynaptic specialization	None	Extended
CC	GO:0099573	glutamatergic postsynaptic density	IEA	AHRD
MF	GO:0106310	protein serine kinase activity	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900180	regulation of protein localization to nucleus	None	Extended
BP	GO:1900181	negative regulation of protein localization to nucleus	None	Extended
BP	GO:1901019	regulation of calcium ion transmembrane transporter activity	None	Extended
BP	GO:1901020	negative regulation of calcium ion transmembrane transporter activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901385	regulation of voltage-gated calcium channel activity	IEA	AHRD
BP	GO:1901386	negative regulation of voltage-gated calcium channel activity	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903169	regulation of calcium ion transmembrane transport	None	Extended
BP	GO:1903170	negative regulation of calcium ion transmembrane transport	None	Extended
BP	GO:1903828	negative regulation of protein localization	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended
BP	GO:1904063	negative regulation of cation transmembrane transport	None	Extended
BP	GO:1904950	negative regulation of establishment of protein localization	None	Extended
BP	GO:1905539	regulation of postsynapse to nucleus signaling pathway	IEA	AHRD
BP	GO:1905962	glutamatergic neuron differentiation	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2001257	regulation of cation channel activity	None	Extended
BP	GO:2001258	negative regulation of cation channel activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000304	response to singlet oxygen	IEP	Predict GO terms from Neighborhoods
CC	GO:0000322	storage vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0000324	fungal-type vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0002253	activation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
BP	GO:0009856	pollination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045492	xylan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048571	long-day photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048574	long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
MF	GO:0050525	cutinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051365	cellular response to potassium ion starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0080116	glucuronoxylan glucuronosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080164	regulation of nitric oxide metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011992	EF-hand-dom_pair	21	85
IPR002048	EF_hand_dom	23	50
IPR002048	EF_hand_dom	68	85

External Links

No external refs found!

SOLTUB.AGRIA.G00000041763

Expression Profile

Co-expression Networks

Functional Annotation