SOLTUB.AGRIA.G00000041931


Description : Embryo defective 3006 protein, putative


Gene families : OG_02_0011433 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041931
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_179


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0000150 DNA strand exchange activity IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0000708 meiotic strand invasion IEP Predict GO terms from Neighborhoods
BP GO:0000709 meiotic joint molecule formation IEP Predict GO terms from Neighborhoods
BP GO:0000722 telomere maintenance via recombination IEP Predict GO terms from Neighborhoods
BP GO:0000723 telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0000724 double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0000725 recombinational repair IEP Predict GO terms from Neighborhoods
BP GO:0000730 DNA recombinase assembly IEP Predict GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
CC GO:0000785 chromatin IEP Predict GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Predict GO terms from Neighborhoods
CC GO:0000800 lateral element IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
BP GO:0001932 regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0002764 immune response-regulating signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002765 immune response-inhibiting signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002767 immune response-inhibiting cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002769 natural killer cell inhibitory signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
BP GO:0006268 DNA unwinding involved in DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006282 regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006312 mitotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0007130 synaptonemal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0007143 female meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007166 cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007294 germarium-derived oocyte fate determination IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007531 mating type determination IEP Predict GO terms from Neighborhoods
BP GO:0007533 mating type switching IEP Predict GO terms from Neighborhoods
MF GO:0008022 protein C-terminus binding IEP Predict GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Predict GO terms from Neighborhoods
BP GO:0008156 negative regulation of DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0008298 intracellular mRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0009292 horizontal gene transfer IEP Predict GO terms from Neighborhoods
BP GO:0009294 DNA-mediated transformation IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009949 polarity specification of anterior/posterior axis IEP Predict GO terms from Neighborhoods
BP GO:0009951 polarity specification of dorsal/ventral axis IEP Predict GO terms from Neighborhoods
BP GO:0010165 response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:0010212 response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0010332 response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0010833 telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
CC GO:0016605 PML body IEP Predict GO terms from Neighborhoods
MF GO:0017116 single-stranded DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
BP GO:0030491 heteroduplex formation IEP Predict GO terms from Neighborhoods
BP GO:0030716 oocyte fate determination IEP Predict GO terms from Neighborhoods
BP GO:0030717 oocyte karyosome formation IEP Predict GO terms from Neighborhoods
BP GO:0031297 replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0032042 mitochondrial DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Predict GO terms from Neighborhoods
CC GO:0035861 site of double-strand break IEP Predict GO terms from Neighborhoods
BP GO:0036297 interstrand cross-link repair IEP Predict GO terms from Neighborhoods
BP GO:0042148 strand invasion IEP Predict GO terms from Neighborhoods
BP GO:0042325 regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0043279 response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0043504 mitochondrial DNA repair IEP Predict GO terms from Neighborhoods
CC GO:0044815 DNA packaging complex IEP Predict GO terms from Neighborhoods
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:0045165 cell fate commitment IEP Predict GO terms from Neighborhoods
MF GO:0046982 protein heterodimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051053 negative regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051054 positive regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051105 regulation of DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0051106 positive regulation of DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0061982 meiosis I cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0061988 karyosome formation IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070182 DNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0070193 synaptonemal complex organization IEP Predict GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071312 cellular response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0071407 cellular response to organic cyclic compound IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0071478 cellular response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0071479 cellular response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0071480 cellular response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072710 response to hydroxyurea IEP Predict GO terms from Neighborhoods
BP GO:0072711 cellular response to hydroxyurea IEP Predict GO terms from Neighborhoods
BP GO:0072718 response to cisplatin IEP Predict GO terms from Neighborhoods
BP GO:0072719 cellular response to cisplatin IEP Predict GO terms from Neighborhoods
BP GO:0072757 cellular response to camptothecin IEP Predict GO terms from Neighborhoods
BP GO:0090329 regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0090735 DNA repair complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0097306 cellular response to alcohol IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
BP GO:0110026 regulation of DNA strand resection involved in replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0110027 negative regulation of DNA strand resection involved in replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0120290 stalled replication fork localization to nuclear periphery IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
BP GO:1901563 response to camptothecin IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1902298 cell cycle DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:1903416 response to glycoside IEP Predict GO terms from Neighborhoods
BP GO:1904631 response to glucoside IEP Predict GO terms from Neighborhoods
MF GO:1905334 Swi5-Sfr1 complex binding IEP Predict GO terms from Neighborhoods
BP GO:1990414 replication-born double-strand break repair via sister chromatid exchange IEP Predict GO terms from Neighborhoods
BP GO:1990426 mitotic recombination-dependent replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:1990505 mitotic DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:1990918 double-strand break repair involved in meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:2000272 negative regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!