Description : Embryo defective 3006 protein, putative
Gene families : OG_02_0011433 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041931 | |
Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_179 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000018 | regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
MF | GO:0000150 | DNA strand exchange activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000280 | nuclear division | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000708 | meiotic strand invasion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000709 | meiotic joint molecule formation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000722 | telomere maintenance via recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000723 | telomere maintenance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000730 | DNA recombinase assembly | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000775 | chromosome, centromeric region | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000781 | chromosome, telomeric region | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000786 | nucleosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000800 | lateral element | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001709 | cell fate determination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002764 | immune response-regulating signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002765 | immune response-inhibiting signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002767 | immune response-inhibiting cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002768 | immune response-regulating cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002769 | natural killer cell inhibitory signaling pathway | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003678 | DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004386 | helicase activity | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005759 | mitochondrial matrix | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005815 | microtubule organizing center | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006268 | DNA unwinding involved in DNA replication | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006275 | regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006302 | double-strand break repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006312 | mitotic recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006403 | RNA localization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007130 | synaptonemal complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007143 | female meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007166 | cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007294 | germarium-derived oocyte fate determination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007530 | sex determination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007531 | mating type determination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007533 | mating type switching | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008022 | protein C-terminus binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008156 | negative regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008298 | intracellular mRNA localization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009292 | horizontal gene transfer | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009294 | DNA-mediated transformation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009636 | response to toxic substance | IEP | Predict GO terms from Neighborhoods |
CC | GO:0009897 | external side of plasma membrane | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009949 | polarity specification of anterior/posterior axis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009951 | polarity specification of dorsal/ventral axis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010165 | response to X-ray | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010212 | response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010332 | response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010469 | regulation of signaling receptor activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010569 | regulation of double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010833 | telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
MF | GO:0017116 | single-stranded DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019902 | phosphatase binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019903 | protein phosphatase binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0022413 | reproductive process in single-celled organism | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030491 | heteroduplex formation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030716 | oocyte fate determination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030717 | oocyte karyosome formation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031297 | replication fork processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032042 | mitochondrial DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032200 | telomere organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032392 | DNA geometric change | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032508 | DNA duplex unwinding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0032993 | protein-DNA complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0035861 | site of double-strand break | IEP | Predict GO terms from Neighborhoods |
BP | GO:0036297 | interstrand cross-link repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042148 | strand invasion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042325 | regulation of phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043279 | response to alkaloid | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043504 | mitochondrial DNA repair | IEP | Predict GO terms from Neighborhoods |
CC | GO:0044815 | DNA packaging complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045165 | cell fate commitment | IEP | Predict GO terms from Neighborhoods |
MF | GO:0046982 | protein heterodimerization activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048285 | organelle fission | IEP | Predict GO terms from Neighborhoods |
CC | GO:0048471 | perinuclear region of cytoplasm | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051105 | regulation of DNA ligation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051106 | positive regulation of DNA ligation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051259 | protein complex oligomerization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051260 | protein homooligomerization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051276 | chromosome organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061982 | meiosis I cell cycle process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061988 | karyosome formation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0065001 | specification of axis polarity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predict GO terms from Neighborhoods |
MF | GO:0070182 | DNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070193 | synaptonemal complex organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071103 | DNA conformation change | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071241 | cellular response to inorganic substance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071312 | cellular response to alkaloid | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071407 | cellular response to organic cyclic compound | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071417 | cellular response to organonitrogen compound | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071478 | cellular response to radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071479 | cellular response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071480 | cellular response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072710 | response to hydroxyurea | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072711 | cellular response to hydroxyurea | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072718 | response to cisplatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072719 | cellular response to cisplatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072757 | cellular response to camptothecin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090735 | DNA repair complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0097306 | cellular response to alcohol | IEP | Predict GO terms from Neighborhoods |
CC | GO:0098552 | side of membrane | IEP | Predict GO terms from Neighborhoods |
CC | GO:0098687 | chromosomal region | IEP | Predict GO terms from Neighborhoods |
BP | GO:0110026 | regulation of DNA strand resection involved in replication fork processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0110027 | negative regulation of DNA strand resection involved in replication fork processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0120290 | stalled replication fork localization to nuclear periphery | IEP | Predict GO terms from Neighborhoods |
BP | GO:0140013 | meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901563 | response to camptothecin | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901699 | cellular response to nitrogen compound | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902298 | cell cycle DNA replication maintenance of fidelity | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903416 | response to glycoside | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904631 | response to glucoside | IEP | Predict GO terms from Neighborhoods |
MF | GO:1905334 | Swi5-Sfr1 complex binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange | IEP | Predict GO terms from Neighborhoods |
BP | GO:1990426 | mitotic recombination-dependent replication fork processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:1990505 | mitotic DNA replication maintenance of fidelity | IEP | Predict GO terms from Neighborhoods |
BP | GO:1990918 | double-strand break repair involved in meiotic recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000104 | negative regulation of DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000272 | negative regulation of signaling receptor activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |