Description : small acidic protein 1
Gene families : OG_02_0006053 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042070 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_521 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000781 | chromosome, telomeric region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000932 | P-body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005688 | U6 snRNP | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016783 | sulfurtransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017070 | U6 snRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030629 | U6 snRNA 3'-end binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031071 | cysteine desulfurase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031312 | extrinsic component of organelle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031314 | extrinsic component of mitochondrial inner membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033962 | P-body assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035770 | ribonucleoprotein granule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036464 | cytoplasmic ribonucleoprotein granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044571 | [2Fe-2S] cluster assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045292 | mRNA cis splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070034 | telomerase RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070925 | organelle assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071005 | U2-type precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098687 | chromosomal region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120115 | Lsm2-8 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140445 | chromosome, telomeric repeat region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905323 | telomerase holoenzyme complex assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990221 | L-cysteine desulfurase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990726 | Lsm1-7-Pat1 complex | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |