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  5. SOLTUB.AGRIA.G00000042148

SOLTUB.AGRIA.G00000042148


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_02_0017440 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042148
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_138


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
BP GO:0042254 ribosome biogenesis IEA AHRD
CC GO:0043232 intracellular non-membrane-bounded organelle IEA AHRD
BP GO:0071826 ribonucleoprotein complex subunit organization IEA AHRD
MF GO:0097159 organic cyclic compound binding IEA AHRD
MF GO:1901363 heterocyclic compound binding IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0000123 histone acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
BP GO:0001503 ossification IEP Predict GO terms from Neighborhoods
BP GO:0001655 urogenital system development IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001837 epithelial to mesenchymal transition IEP Predict GO terms from Neighborhoods
BP GO:0001893 maternal placenta development IEP Predict GO terms from Neighborhoods
BP GO:0002526 acute inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0003407 neural retina development IEP Predict GO terms from Neighborhoods
MF GO:0003997 acyl-CoA oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004630 phospholipase D activity IEP Predict GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005504 fatty acid binding IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Predict GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005782 peroxisomal matrix IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006023 aminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006029 proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006646 phosphatidylethanolamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006692 prostanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006693 prostaglandin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006901 vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0006953 acute-phase response IEP Predict GO terms from Neighborhoods
BP GO:0006954 inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0007044 cell-substrate junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0007276 gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007283 spermatogenesis IEP Predict GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
MF GO:0008460 dTDP-glucose 4,6-dehydratase activity IEP Predict GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009100 glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009101 glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009225 nucleotide-sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0009395 phospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009695 jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010044 response to aluminum ion IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0014029 neural crest formation IEP Predict GO terms from Neighborhoods
BP GO:0014032 neural crest cell development IEP Predict GO terms from Neighborhoods
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016401 palmitoyl-CoA oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Predict GO terms from Neighborhoods
BP GO:0016540 protein autoprocessing IEP Predict GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Predict GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019305 dTDP-rhamnose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
MF GO:0030165 PDZ domain binding IEP Predict GO terms from Neighborhoods
BP GO:0030166 proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Predict GO terms from Neighborhoods
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030203 glycosaminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030204 chondroitin sulfate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030206 chondroitin sulfate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030334 regulation of cell migration IEP Predict GO terms from Neighborhoods
MF GO:0030371 translation repressor activity IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0031398 positive regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031581 hemidesmosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Predict GO terms from Neighborhoods
CC GO:0031907 microbody lumen IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032490 detection of molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0032497 detection of lipopolysaccharide IEP Predict GO terms from Neighborhoods
CC GO:0032580 Golgi cisterna membrane IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
MF GO:0033293 monocarboxylic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0033319 UDP-D-xylose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033320 UDP-D-xylose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase IEP Predict GO terms from Neighborhoods
BP GO:0033559 unsaturated fatty acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033791 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0034046 poly(G) binding IEP Predict GO terms from Neighborhoods
BP GO:0034329 cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0034638 phosphatidylcholine catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0035097 histone methyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
MF GO:0035613 RNA stem-loop binding IEP Predict GO terms from Neighborhoods
MF GO:0038187 pattern recognition receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0040012 regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042461 photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042462 eye photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042632 cholesterol homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0042732 D-xylose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042760 very long-chain fatty acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042810 pheromone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042811 pheromone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
BP GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043967 histone H4 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044182 filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045492 xylan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046337 phosphatidylethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046383 dTDP-rhamnose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046466 membrane lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046470 phosphatidylcholine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046475 glycerophospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046486 glycerolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046503 glycerolipid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046625 sphingolipid binding IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0047485 protein N-terminus binding IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0048208 COPII vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0048232 male gamete generation IEP Predict GO terms from Neighborhoods
MF GO:0048306 calcium-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
BP GO:0048762 mesenchymal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051216 cartilage development IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0055092 sterol homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060042 retina morphogenesis in camera-type eye IEP Predict GO terms from Neighborhoods
BP GO:0060135 maternal process involved in female pregnancy IEP Predict GO terms from Neighborhoods
BP GO:0060562 epithelial tube morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity IEP Predict GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0071446 cellular response to salicylic acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Predict GO terms from Neighborhoods
BP GO:0072396 response to cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072402 response to DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072423 response to DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
MF GO:0097001 ceramide binding IEP Predict GO terms from Neighborhoods
CC GO:0097730 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
BP GO:0098787 mRNA cleavage involved in mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0098789 pre-mRNA cleavage required for polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0140493 very long-chain fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
MF GO:0140767 enzyme-substrate adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0150115 cell-substrate junction organization IEP Predict GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902525 regulation of protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1902527 positive regulation of protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1902882 regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1902884 positive regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1903409 reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903510 mucopolysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903684 regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
BP GO:1903688 positive regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
BP GO:1904069 ascaroside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904070 ascaroside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:1990756 ubiquitin ligase-substrate adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000145 regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2001056 positive regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036322 WD40_repeat_dom_sf 192 420
IPR001680 WD40_repeat 303 340
No external refs found!