SOLTUB.AGRIA.G00000042324

Description : Delta-12 fatty acid desaturase

Gene families : OG_02_0011390 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042324
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_224

Type	GO Term	Name	Evidence	Source
BP	GO:0001676	long-chain fatty acid metabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEA	AHRD
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
CC	GO:0031301	integral component of organelle membrane	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033559	unsaturated fatty acid metabolic process	None	Extended
BP	GO:0036109	alpha-linolenic acid metabolic process	IEA	AHRD
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045485	omega-6 fatty acid desaturase activity	IEA	AHRD
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0050183	phosphatidylcholine 12-monooxygenase activity	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0102518	(11Z)-eicosenoate 14-hydroxylase activity	IEA	AHRD
MF	GO:0102985	delta12-fatty-acid desaturase activity	IEA	AHRD
MF	GO:0102987	palmitoleic acid delta 12 desaturase activity	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0031012	extracellular matrix	IEP	Predict GO terms from Neighborhoods
MF	GO:0050184	phosphatidylcholine desaturase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102855	1-18:1-2-18:2-phosphatidylcholine desaturase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102857	1-18:1-2-18:3-phosphatidylcholinedesaturase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102860	1-18:1-2-18:2-phosphatidylcholine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102861	1-18:2-2-18:1-phosphatidylcholine desaturase activity (SN2-18:2 forming)	IEP	Predict GO terms from Neighborhoods
MF	GO:0102871	1-16:0-2-18:1-phosphatidylcholine desaturase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021863	FAS_N	15	64
IPR005804	FA_desaturase_dom	85	346

External Links

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SOLTUB.AGRIA.G00000042324

Expression Profile

Co-expression Networks

Functional Annotation