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  5. SOLTUB.AGRIA.G00000042626

SOLTUB.AGRIA.G00000042626


Description : Transposase tnp2


Gene families : OG_02_0018033 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042626
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_70

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000030783 No alias TdcA1-ORF1-ORF2 protein 0.11 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030783 No alias TdcA1-ORF1-ORF2 protein 0.11 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030783 No alias TdcA1-ORF1-ORF2 protein 0.11 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.06 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
MF GO:0009702 L-arabinokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034620 cellular response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0046835 carbohydrate phosphorylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029480 Transpos_assoc 5 85
IPR025452 DUF4218 103 182
No external refs found!