SOLTUB.AGRIA.G00000042857


Description : Replication factor-A carboxy-terminal domain protein


Gene families : OG_02_0001572 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042857
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_11


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004049 anthranilate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Predict GO terms from Neighborhoods
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0005950 anthranilate synthase complex IEP Predict GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009413 response to flooding IEP Predict GO terms from Neighborhoods
CC GO:0009501 amyloplast IEP Predict GO terms from Neighborhoods
BP GO:0009606 tropism IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009701 isoflavonoid phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009717 isoflavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009830 cell wall modification involved in abscission IEP Predict GO terms from Neighborhoods
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
MF GO:0009881 photoreceptor activity IEP Predict GO terms from Neighborhoods
MF GO:0009882 blue light photoreceptor activity IEP Predict GO terms from Neighborhoods
BP GO:0009908 flower development IEP Predict GO terms from Neighborhoods
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0010360 negative regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0010361 regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
MF GO:0016833 oxo-acid-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0017096 acetylserotonin O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0030186 melatonin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030187 melatonin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0030746 isoflavone 4'-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0030761 8-hydroxyquercitin 8-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0030766 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0031137 regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0031138 negative regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predict GO terms from Neighborhoods
CC GO:0033620 Mei2 nuclear dot complex IEP Predict GO terms from Neighborhoods
MF GO:0033799 myricetin 3'-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0033800 isoflavone 7-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0034064 Tor2-Mei2-Ste11 complex IEP Predict GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042435 indole-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044277 cell wall disassembly IEP Predict GO terms from Neighborhoods
MF GO:0045544 gibberellin 20-oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0045836 positive regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0046287 isoflavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046289 isoflavonoid phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods
BP GO:0048827 phyllome development IEP Predict GO terms from Neighborhoods
BP GO:0061635 regulation of protein complex stability IEP Predict GO terms from Neighborhoods
BP GO:0062075 pollen aperture formation IEP Predict GO terms from Neighborhoods
MF GO:0070273 phosphatidylinositol-4-phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0102990 5-n-alk(en)ylresorcinol O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0110046 signal transduction involved in cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0140311 protein sequestering activity IEP Predict GO terms from Neighborhoods
MF GO:0140313 molecular sequestering activity IEP Predict GO terms from Neighborhoods
BP GO:0140538 negative regulation of conjugation with zygote IEP Predict GO terms from Neighborhoods
BP GO:1901993 regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901995 positive regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902102 regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902104 positive regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1903792 negative regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:1903960 negative regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1905132 regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905134 positive regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905189 regulation of metaphase/anaphase transition of meiosis II IEP Predict GO terms from Neighborhoods
BP GO:1905191 positive regulation of metaphase/anaphase transition of meiosis II IEP Predict GO terms from Neighborhoods
BP GO:2000114 regulation of establishment of cell polarity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003871 DUF223 43 113
IPR012340 NA-bd_OB-fold 4 114
IPR012340 NA-bd_OB-fold 121 243
IPR013955 Rep_factor-A_C 268 374
IPR012340 NA-bd_OB-fold 264 385
No external refs found!