Description : Ribosomal RNA small subunit methyltransferase J
Gene families : OG_02_0007822 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000043187 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_51 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000741 | karyogamy | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006997 | nucleus organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010197 | polar nucleus fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010305 | leaf vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010588 | cotyledon vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016556 | mRNA modification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030527 | structural constituent of chromatin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031048 | small non-coding RNA-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031425 | chloroplast RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031507 | heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031981 | nuclear lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040029 | epigenetic regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048284 | organelle fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070828 | heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080156 | mitochondrial mRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140718 | facultative heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900864 | mitochondrial RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900865 | chloroplast RNA modification | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |