Description : Cytosine-specific methyltransferase
Gene families : OG_02_0001579 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s):
Sequence : coding (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000043360 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_72 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000070 | mitotic sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000280 | nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000819 | sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000910 | cytokinesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001817 | regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001818 | negative regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001819 | positive regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002221 | pattern recognition receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002237 | response to molecule of bacterial origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002683 | negative regulation of immune system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002694 | regulation of leukocyte activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002696 | positive regulation of leukocyte activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002697 | regulation of immune effector process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002699 | positive regulation of immune effector process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002700 | regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002702 | positive regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002718 | regulation of cytokine production involved in immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002720 | positive regulation of cytokine production involved in immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002764 | immune response-regulating signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002828 | regulation of type 2 immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002830 | positive regulation of type 2 immune response | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005096 | GTPase activator activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005640 | nuclear outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005815 | microtubule organizing center | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005819 | spindle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005874 | microtubule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006606 | protein import into nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006810 | transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006887 | exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007059 | chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007063 | regulation of sister chromatid cohesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007127 | meiosis I | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008047 | enzyme activator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009504 | cell plate | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009524 | phragmoplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009960 | endosperm development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010286 | heat acclimation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010369 | chromocenter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019867 | outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031072 | heat shock protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031396 | regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031398 | positive regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031965 | nuclear membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031968 | organelle outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032102 | negative regulation of response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032153 | cell division site | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032494 | response to peptidoglycan | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032495 | response to muramyl dipeptide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032496 | response to lipopolysaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032651 | regulation of interleukin-1 beta production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032652 | regulation of interleukin-1 production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032675 | regulation of interleukin-6 production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032680 | regulation of tumor necrosis factor production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032872 | regulation of stress-activated MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032874 | positive regulation of stress-activated MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032878 | regulation of establishment or maintenance of cell polarity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032940 | secretion by cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042325 | regulation of phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043122 | regulation of I-kappaB kinase/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043408 | regulation of MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043410 | positive regulation of MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045787 | positive regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045876 | positive regulation of sister chromatid cohesion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046903 | secretion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048285 | organelle fission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048527 | lateral root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048528 | post-embryonic root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050727 | regulation of inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050728 | negative regulation of inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050777 | negative regulation of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050865 | regulation of cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050867 | positive regulation of cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051090 | regulation of DNA-binding transcription factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051170 | import into nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051234 | establishment of localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051249 | regulation of lymphocyte activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051251 | positive regulation of lymphocyte activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051276 | chromosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051304 | chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051307 | meiotic chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051345 | positive regulation of hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051606 | detection of stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060969 | obsolete negative regulation of gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070302 | regulation of stress-activated protein kinase signaling cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070304 | positive regulation of stress-activated protein kinase signaling cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071216 | cellular response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071219 | cellular response to molecule of bacterial origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071417 | cellular response to organonitrogen compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080134 | regulation of response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080135 | regulation of cellular response to stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090068 | positive regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090696 | post-embryonic plant organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098581 | detection of external biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099081 | supramolecular polymer | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099512 | supramolecular fiber | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140013 | meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140352 | export from cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900015 | regulation of cytokine production involved in inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900034 | regulation of cellular response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901222 | regulation of NIK/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901651 | obsolete regulation of mitotic chromosome decondensation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901652 | response to peptide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901653 | cellular response to peptide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901699 | cellular response to nitrogen compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902532 | negative regulation of intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902533 | positive regulation of intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903320 | regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903322 | positive regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903555 | regulation of tumor necrosis factor superfamily cytokine production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000114 | regulation of establishment of cell polarity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001252 | positive regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022702 | Cytosine_MeTrfase1_RFD | 411 | 563 |
| IPR022702 | Cytosine_MeTrfase1_RFD | 102 | 235 |
| IPR001525 | C5_MeTfrase | 1114 | 1537 |
| IPR001525 | C5_MeTfrase | 1113 | 1157 |
| IPR001525 | C5_MeTfrase | 1198 | 1539 |
| IPR001025 | BAH_dom | 929 | 1068 |
| IPR001025 | BAH_dom | 757 | 887 |
| IPR029063 | SAM-dependent_MTases_sf | 1110 | 1539 |
| No external refs found! |