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  5. SOLTUB.AGRIA.G00000043393

SOLTUB.AGRIA.G00000043393


Description : ATP synthase subunit beta, chloroplastic


Gene families : OG_02_0000667 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000043393
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_111

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000040828 No alias ATP synthase subunit beta, chloroplastic 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040828 No alias ATP synthase subunit beta, chloroplastic 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040828 No alias ATP synthase subunit beta, chloroplastic 0.03 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002181 cytoplasmic translation IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005722 ATP_synth_F1_bsu 21 490
IPR004100 ATPase_F1/V1/A1_a/bsu_N 23 95
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 152 372
IPR036121 ATPase_F1/V1/A1_a/bsu_N_sf 20 97
IPR027417 P-loop_NTPase 99 377
No external refs found!