SOLTUB.AGRIA.G00000043436


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG_02_0009330 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000043436
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_636


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001919 regulation of receptor recycling IEP Predict GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
CC GO:0005776 autophagosome IEP Predict GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010506 regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0016241 regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Predict GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0034499 late endosome to Golgi transport IEP Predict GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predict GO terms from Neighborhoods
CC GO:0042470 melanosome IEP Predict GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043547 positive regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
CC GO:0048770 pigment granule IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051345 positive regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Predict GO terms from Neighborhoods
BP GO:1901096 regulation of autophagosome maturation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035969 Rab-GTPase_TBC_sf 289 447
IPR000195 Rab-GTPase-TBC_dom 195 358
IPR035969 Rab-GTPase_TBC_sf 98 312
No external refs found!