Description : Splicing factor u2af large subunit, putative
Gene families : OG_02_0028562 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044061 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_222 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000165 | MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000389 | mRNA 3'-splice site recognition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002009 | morphogenesis of an epithelium | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004540 | ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004708 | MAP kinase kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004712 | protein serine/threonine/tyrosine kinase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005686 | U2 snRNP | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006914 | autophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007281 | germ cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007417 | central nervous system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008283 | cell population proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008544 | epidermis development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010082 | regulation of root meristem growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014013 | regulation of gliogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016441 | post-transcriptional gene silencing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019236 | response to pheromone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030422 | siRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031098 | stress-activated protein kinase signaling cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031137 | regulation of conjugation with cellular fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031139 | positive regulation of conjugation with cellular fusion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031981 | nuclear lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032153 | cell division site | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032206 | positive regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032989 | cellular component morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035194 | post-transcriptional gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035295 | tube development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043410 | positive regulation of MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045292 | mRNA cis splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048235 | pollen sperm cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048608 | reproductive structure development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048666 | neuron development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048729 | tissue morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048731 | system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050767 | regulation of neurogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051301 | cell division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051347 | positive regulation of transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051403 | stress-activated MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051960 | regulation of nervous system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070918 | small regulatory ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071004 | U2-type prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071010 | prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071944 | cell periphery | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072359 | circulatory system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090333 | regulation of stomatal closure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000278 | regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000573 | positive regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001252 | positive regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |