Description : Phd finger protein alfin-like 7
Gene families : OG_02_0007724 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044104 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000339 | RNA cap binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000340 | RNA 7-methylguanosine cap binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000347 | THO complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000445 | THO complex part of transcription export complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001094 | TFIID-class transcription factor complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005834 | heterotrimeric G-protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005845 | mRNA cap binding complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005846 | nuclear cap binding complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006408 | snRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006446 | regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006497 | protein lipidation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007602 | phototransduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009583 | detection of light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009585 | red, far-red light phototransduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010294 | abscisic acid glucosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010541 | acropetal auxin transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018342 | protein prenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018345 | protein palmitoylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030422 | siRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031053 | primary miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031440 | regulation of mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031442 | positive regulation of mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032239 | regulation of nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032241 | positive regulation of nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032388 | positive regulation of intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034518 | RNA cap binding complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035064 | methylated histone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042753 | positive regulation of circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043388 | positive regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045069 | regulation of viral genome replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045071 | negative regulation of viral genome replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045292 | mRNA cis splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045446 | endothelial cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046822 | regulation of nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046824 | positive regulation of nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046831 | regulation of RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046833 | positive regulation of RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048525 | negative regulation of viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050657 | nucleic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050658 | RNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050685 | positive regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050792 | regulation of viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051028 | mRNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051030 | snRNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051101 | regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051168 | nuclear export | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080044 | quercetin 7-O-glucosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097064 | ncRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097354 | prenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098787 | mRNA cleavage involved in mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098789 | pre-mRNA cleavage required for polyadenylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140034 | methylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140110 | transcription regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900056 | negative regulation of leaf senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903900 | regulation of viral life cycle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905360 | GTPase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |