SOLTUB.AGRIA.G00000004498

Description : Protein agamous-like 98

Gene families : OG_02_0000644 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004498
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_111

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006595	polyamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008300	isoprenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009395	phospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0009975	cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010154	fruit development	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010334	sesquiterpene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010487	thermospermine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016115	terpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016413	O-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016768	spermine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033383	geranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034002	(R)-limonene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034008	R-linalool synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043692	monoterpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043693	monoterpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043919	agmatine aminopropyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045338	farnesyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045339	farnesyl diphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045491	xylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0050314	sym-norspermidine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050550	pinene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050551	myrcene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050552	(4S)-limonene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080015	sabinene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900673	olefin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900674	olefin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901938	(-)-exo-alpha-bergamotene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901940	(-)-exo-alpha-bergamotene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901941	(+)-epi-alpha-bisabolol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901943	(+)-epi-alpha-bisabolol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905177	tracheary element differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:1990538	xylan O-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990937	xylan acetylation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	16	53
IPR036879	TF_MADSbox_sf	9	80

External Links

No external refs found!

SOLTUB.AGRIA.G00000004498

Expression Profile

Co-expression Networks

Functional Annotation