SOLTUB.AGRIA.G00000004510


Description : E3 ubiquitin-protein ligase RNF170


Gene families : OG_02_0012487 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004510
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_141


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0000098 sulfur amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001887 selenium compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0002020 protease binding IEP Predict GO terms from Neighborhoods
BP GO:0003333 amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0003962 cystathionine gamma-synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004123 cystathionine gamma-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004620 phospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0004805 trehalose-phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0005351 carbohydrate:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005354 galactose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005365 myo-inositol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005366 myo-inositol:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005402 carbohydrate:cation symporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005946 alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006625 protein targeting to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0006907 pinocytosis IEP Predict GO terms from Neighborhoods
BP GO:0007031 peroxisome organization IEP Predict GO terms from Neighborhoods
BP GO:0007338 single fertilization IEP Predict GO terms from Neighborhoods
MF GO:0008324 cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008645 hexose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009068 aspartate family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009087 methionine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009092 homoserine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009395 phospholipid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0009679 hexose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009702 L-arabinokinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009970 cellular response to sulfate starvation IEP Predict GO terms from Neighborhoods
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015146 pentose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015147 L-arabinose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015149 hexose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015150 fucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015166 polyol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015295 solute:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015517 galactose:proton symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015749 monosaccharide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015750 pentose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015751 arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015756 fucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015757 galactose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015791 polyol transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015798 myo-inositol transport IEP Predict GO terms from Neighborhoods
BP GO:0015807 L-amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015919 peroxisomal membrane transport IEP Predict GO terms from Neighborhoods
MF GO:0016278 lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016298 lipase activity IEP Predict GO terms from Neighborhoods
BP GO:0016558 protein import into peroxisome matrix IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0018826 methionine gamma-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019203 carbohydrate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019343 cysteine biosynthetic process via cystathionine IEP Predict GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019346 transsulfuration IEP Predict GO terms from Neighborhoods
BP GO:0019458 methionine catabolic process via 2-oxobutanoate IEP Predict GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030437 ascospore formation IEP Predict GO terms from Neighborhoods
BP GO:0034219 carbohydrate transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0035097 histone methyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0035264 multicellular organism growth IEP Predict GO terms from Neighborhoods
MF GO:0042054 histone methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
MF GO:0042800 histone methyltransferase activity (H3-K4 specific) IEP Predict GO terms from Neighborhoods
BP GO:0042882 L-arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0042900 arabinose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0043574 peroxisomal transport IEP Predict GO terms from Neighborhoods
BP GO:0043935 sexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044273 sulfur compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044351 macropinocytosis IEP Predict GO terms from Neighborhoods
CC GO:0044666 MLL3/4 complex IEP Predict GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046835 carbohydrate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0048145 regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048146 positive regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050667 homocysteine metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051117 ATPase binding IEP Predict GO terms from Neighborhoods
MF GO:0051119 sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051289 protein homotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051568 histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0061029 eyelid development in camera-type eye IEP Predict GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070413 trehalose metabolism in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0072662 protein localization to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0072663 establishment of protein localization to peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0097692 histone H3-K4 monomethylation IEP Predict GO terms from Neighborhoods
MF GO:0102986 trehalose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902003 regulation of amyloid-beta formation IEP Predict GO terms from Neighborhoods
BP GO:1902004 positive regulation of amyloid-beta formation IEP Predict GO terms from Neighborhoods
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902991 regulation of amyloid precursor protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902993 positive regulation of amyloid precursor protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904679 myo-inositol import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 103 145
No external refs found!