SOLTUB.AGRIA.G00000004780

Description : GATA transcription factor, putative

Gene families : OG_02_0018472 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004780
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000132	establishment of mitotic spindle orientation	IEP	Predict GO terms from Neighborhoods
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001934	positive regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002684	positive regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002685	regulation of leukocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0002687	positive regulation of leukocyte migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005834	heterotrimeric G-protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006884	cell volume homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006909	phagocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006935	chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007188	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007189	adenylate cyclase-activating G protein-coupled receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007584	response to nutrient	IEP	Predict GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008092	cytoskeletal protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008217	regulation of blood pressure	IEP	Predict GO terms from Neighborhoods
BP	GO:0008361	regulation of cell size	IEP	Predict GO terms from Neighborhoods
BP	GO:0009267	cellular response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009723	response to ethylene	IEP	Predict GO terms from Neighborhoods
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009792	embryo development ending in birth or egg hatching	IEP	Predict GO terms from Neighborhoods
BP	GO:0009845	seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010118	stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010154	fruit development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010562	positive regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010638	positive regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010906	regulation of glucose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016477	cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019216	regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019218	regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030029	actin filament-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030036	actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030159	signaling receptor complex adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030334	regulation of cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0030335	positive regulation of cell migration	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
MF	GO:0030507	spectrin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Predict GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030865	cortical cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030866	cortical actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Predict GO terms from Neighborhoods
BP	GO:0031152	aggregation involved in sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031334	positive regulation of protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031401	positive regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0031682	G-protein gamma-subunit binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032273	positive regulation of protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032350	regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Predict GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033273	response to vitamin	IEP	Predict GO terms from Neighborhoods
BP	GO:0033674	positive regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0035591	signaling adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040001	establishment of mitotic spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0040011	locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0040012	regulation of locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0040013	negative regulation of locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0040017	positive regulation of locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042325	regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042327	positive regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042330	taxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0043005	neuron projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043326	chemotaxis to folate	IEP	Predict GO terms from Neighborhoods
BP	GO:0043327	chemotaxis to cAMP	IEP	Predict GO terms from Neighborhoods
BP	GO:0043405	regulation of MAP kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043406	positive regulation of MAP kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043408	regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0043410	positive regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0043547	positive regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043549	regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Predict GO terms from Neighborhoods
CC	GO:0044297	cell body	IEP	Predict GO terms from Neighborhoods
BP	GO:0045598	regulation of fat cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045859	regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045860	positive regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045937	positive regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0046579	positive regulation of Ras protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0046662	regulation of oviposition	IEP	Predict GO terms from Neighborhoods
CC	GO:0048471	perinuclear region of cytoplasm	IEP	Predict GO terms from Neighborhoods
BP	GO:0048527	lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048528	post-embryonic root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048548	regulation of pinocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048870	cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:0048883	neuromast primordium migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0048920	posterior lateral line neuromast primordium migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0050795	regulation of behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051057	positive regulation of small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051293	establishment of spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051294	establishment of spindle orientation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051338	regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051345	positive regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051347	positive regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051593	response to folic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0051640	organelle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051653	spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051656	establishment of organelle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071902	positive regulation of protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Predict GO terms from Neighborhoods
BP	GO:0090181	regulation of cholesterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090207	regulation of triglyceride metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090696	post-embryonic plant organ development	IEP	Predict GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0099120	socially cooperative development	IEP	Predict GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0140582	adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1902610	response to N-phenylthiourea	IEP	Predict GO terms from Neighborhoods
BP	GO:1902622	regulation of neutrophil migration	IEP	Predict GO terms from Neighborhoods
BP	GO:1902624	positive regulation of neutrophil migration	IEP	Predict GO terms from Neighborhoods
BP	GO:1902850	microtubule cytoskeleton organization involved in mitosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903664	regulation of asexual reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903665	negative regulation of asexual reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905301	regulation of macropinocytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:1905360	GTPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000145	regulation of cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:2000147	positive regulation of cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	237	272
IPR010399	Tify_dom	105	136
IPR010402	CCT_domain	169	211

External Links

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SOLTUB.AGRIA.G00000004780

Expression Profile

Co-expression Networks

Functional Annotation