SOLTUB.AGRIA.G00000004850

Description : Squalene monooxygenase, putative

Gene families : OG_02_0012555 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000004850
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002238	response to molecule of fungal origin	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008204	ergosterol metabolic process	IEA	AHRD
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	IEA	AHRD
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	IEA	AHRD
BP	GO:0016128	phytosteroid metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	AHRD
BP	GO:0030447	filamentous growth	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042214	terpene metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	IEA	AHRD
BP	GO:0042594	response to starvation	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	IEA	AHRD
BP	GO:0044107	cellular alcohol metabolic process	None	Extended
BP	GO:0044182	filamentous growth of a population of unicellular organisms	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046246	terpene biosynthetic process	IEA	AHRD
BP	GO:0050789	regulation of biological process	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	IEA	AHRD
BP	GO:0051716	cellular response to stimulus	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071731	response to nitric oxide	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902438	response to vanadate(3-)	IEA	AHRD
BP	GO:1902652	secondary alcohol metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004506	squalene monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005504	fatty acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005782	peroxisomal matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006560	proline metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006561	proline biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006692	prostanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006693	prostaglandin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006790	sulfur compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008146	sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009694	jasmonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009750	response to fructose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009756	carbohydrate mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0009806	lignan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009807	lignan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010182	sugar mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0010301	xanthoxin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Predict GO terms from Neighborhoods
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015691	cadmium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016098	monoterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016099	monoterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016131	brassinosteroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016143	S-glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016144	S-glycoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016401	palmitoyl-CoA oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016559	peroxisome fission	IEP	Predict GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018458	isopiperitenol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018459	carveol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019757	glycosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019758	glycosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019760	glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019761	glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030165	PDZ domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0031406	carboxylic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031524	menthol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031525	menthol biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031907	microbody lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032260	response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033293	monocarboxylic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0033540	fatty acid beta-oxidation using acyl-CoA oxidase	IEP	Predict GO terms from Neighborhoods
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033791	3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042632	cholesterol homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042760	very long-chain fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042810	pheromone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042811	pheromone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047364	desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047485	protein N-terminus binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Predict GO terms from Neighborhoods
BP	GO:0051238	sequestering of metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051262	protein tetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051289	protein homotetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0055092	sterol homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080066	3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080067	4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080068	5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080069	7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080070	8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080071	indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080118	brassinosteroid sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080131	hydroxyjasmonate sulfotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102911	(-)-secoisolariciresinol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140493	very long-chain fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902653	secondary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902882	regulation of response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1902884	positive regulation of response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904069	ascaroside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904070	ascaroside biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1990135	flavonoid sulfotransferase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036188	FAD/NAD-bd_sf	17	268
IPR013698	Squalene_epoxidase	207	247
IPR013698	Squalene_epoxidase	104	202

External Links

No external refs found!

SOLTUB.AGRIA.G00000004850

Expression Profile

Co-expression Networks

Functional Annotation