Description : Ribosomal RNA small subunit methyltransferase H
Gene families : OG_02_0012660 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005269 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_152 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003747 | translation release factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004035 | alkaline phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004047 | aminomethyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004127 | cytidylate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004550 | nucleoside diphosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004791 | thioredoxin-disulfide reductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004823 | leucine-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004829 | threonine-tRNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005504 | fatty acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005960 | glycine cleavage complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005977 | glycogen metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005978 | glycogen biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006071 | glycerol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006111 | regulation of gluconeogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006112 | energy reserve metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006114 | glycerol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006415 | translational termination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006429 | leucyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006435 | threonyl-tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006470 | protein dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006544 | glycine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006546 | glycine catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006730 | one-carbon metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008079 | translation termination factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008878 | glucose-1-phosphate adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008967 | phosphoglycolate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009111 | vitamin catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009501 | amyloplast | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009526 | plastid envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009535 | chloroplast thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009536 | plastid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009575 | chromoplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009773 | photosynthetic electron transport in photosystem I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009853 | photorespiration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010028 | xanthophyll cycle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010170 | glucose-1-phosphate adenylyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010566 | regulation of ketone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010598 | NAD(P)H dehydrogenase complex (plastoquinone) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010677 | negative regulation of cellular carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010795 | regulation of ubiquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016122 | xanthophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016149 | translation release factor activity, codon specific | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0017101 | aminoacyl-tRNA synthetase multienzyme complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019252 | starch biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019400 | alditol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019401 | alditol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019430 | removal of superoxide radicals | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019464 | glycine decarboxylation via glycine cleavage system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019838 | growth factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022900 | electron transport chain | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030027 | lamellipodium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030834 | regulation of actin filament depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030836 | positive regulation of actin filament depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031154 | culmination involved in sorocarp development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031247 | actin rod assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031256 | leading edge membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031405 | lipoic acid binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031967 | organelle envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031975 | envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032361 | pyridoxal phosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032544 | plastid translation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032587 | ruffle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033883 | pyridoxal phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035335 | peptidyl-tyrosine dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035970 | peptidyl-threonine dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042170 | plastid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042365 | water-soluble vitamin catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042651 | thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042820 | vitamin B6 catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043023 | ribosomal large subunit binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043136 | glycerol-3-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043233 | organelle lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043446 | cellular alkane metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043448 | alkane catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045721 | negative regulation of gluconeogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046173 | polyol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046185 | aldehyde catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046940 | nucleoside monophosphate phosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047134 | protein-disulfide reductase (NAD(P)) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047938 | glucose-6-phosphate 1-epimerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051017 | actin filament bundle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051302 | regulation of cell division | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055035 | plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070938 | contractile ring | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097009 | energy homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0098519 | obsolete nucleotide phosphatase activity, acting on free nucleotides | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098807 | chloroplast thylakoid membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110102 | ribulose bisphosphate carboxylase complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120253 | hydrocarbon catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901881 | positive regulation of protein depolymerization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902503 | adenylyltransferase complex | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |