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  5. SOLTUB.AGRIA.G00000000506

SOLTUB.AGRIA.G00000000506


Description : Zinc finger ccch domain-containing protein 17


Gene families : OG_02_0007397 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000506
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_167


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0000387 spliceosomal snRNP assembly IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001501 skeletal system development IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
MF GO:0004132 dCMP deaminase activity IEP Predict GO terms from Neighborhoods
CC GO:0005671 obsolete Ada2/Gcn5/Ada3 transcription activator complex IEP Predict GO terms from Neighborhoods
CC GO:0005684 U2-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005688 U6 snRNP IEP Predict GO terms from Neighborhoods
BP GO:0006111 regulation of gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006226 dUMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006231 dTMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0007423 sensory organ development IEP Predict GO terms from Neighborhoods
BP GO:0007482 haltere development IEP Predict GO terms from Neighborhoods
BP GO:0007507 heart development IEP Predict GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008276 protein methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008340 determination of adult lifespan IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009828 plant-type cell wall loosening IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010676 positive regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010906 regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010907 positive regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016278 lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031058 positive regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031060 regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031061 negative regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031175 neuron projection development IEP Predict GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033962 P-body assembly IEP Predict GO terms from Neighborhoods
CC GO:0034708 methyltransferase complex IEP Predict GO terms from Neighborhoods
MF GO:0035064 methylated histone binding IEP Predict GO terms from Neighborhoods
CC GO:0035097 histone methyltransferase complex IEP Predict GO terms from Neighborhoods
MF GO:0042054 histone methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0042731 PH domain binding IEP Predict GO terms from Neighborhoods
MF GO:0042800 histone methyltransferase activity (H3-K4 specific) IEP Predict GO terms from Neighborhoods
BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043967 histone H4 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043981 histone H4-K5 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043982 histone H4-K8 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043984 histone H4-K16 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044545 NSL complex IEP Predict GO terms from Neighborhoods
CC GO:0044665 MLL1/2 complex IEP Predict GO terms from Neighborhoods
CC GO:0044666 MLL3/4 complex IEP Predict GO terms from Neighborhoods
BP GO:0045722 positive regulation of gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045913 positive regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046073 dTMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046078 dUMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0048188 Set1C/COMPASS complex IEP Predict GO terms from Neighborhoods
BP GO:0048589 developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048736 appendage development IEP Predict GO terms from Neighborhoods
BP GO:0048737 imaginal disc-derived appendage development IEP Predict GO terms from Neighborhoods
BP GO:0051569 regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051571 positive regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051572 negative regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0060290 transdifferentiation IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071339 MLL1 complex IEP Predict GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
CC GO:0120115 Lsm2-8 complex IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140034 methylation-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:1902562 H4 histone acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:1903052 positive regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036855 Znf_CCCH_sf 119 143
IPR000571 Znf_CCCH 122 143
IPR041686 Znf-CCCH_3 30 84
No external refs found!