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  5. SOLTUB.AGRIA.G00000005581

SOLTUB.AGRIA.G00000005581


Description : serine/threonine-protein phosphatase 7 long form-like protein


Gene families : OG_02_0000035 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005581
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000002671 No alias Aminotransferase-like, plant mobile domain family protein 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040163 No alias Aminotransferase-like, plant mobile domain family protein 0.17 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002671 No alias Aminotransferase-like, plant mobile domain family protein 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040163 No alias Aminotransferase-like, plant mobile domain family protein 0.17 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002671 No alias Aminotransferase-like, plant mobile domain family protein 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040163 No alias Aminotransferase-like, plant mobile domain family protein 0.17 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001732 formation of cytoplasmic translation initiation complex IEP Predict GO terms from Neighborhoods
BP GO:0003360 brainstem development IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006446 regulation of translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0007420 brain development IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0010720 positive regulation of cell development IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0031346 positive regulation of cell projection organization IEP Predict GO terms from Neighborhoods
CC GO:0031672 A band IEP Predict GO terms from Neighborhoods
CC GO:0033290 eukaryotic 48S preinitiation complex IEP Predict GO terms from Neighborhoods
BP GO:0042255 ribosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0042256 mature ribosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0050767 regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0070993 translation preinitiation complex IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 98 205
No external refs found!