SOLTUB.AGRIA.G00000005723

Description : Disease resistance protein RGA2

Gene families : OG_02_0000042 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005723
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_177

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0005539	glycosaminoglycan binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006829	zinc ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009233	menaquinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009234	menaquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009705	plant-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009820	alkaloid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009821	alkaloid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010231	maintenance of seed dormancy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010440	stomatal lineage progression	IEP	Predict GO terms from Neighborhoods
MF	GO:0015101	organic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015203	polyamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015204	urea transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015489	putrescine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015606	spermidine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015695	organic cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015840	urea transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015846	polyamine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015847	putrescine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015848	spermidine transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0018674	(S)-limonene 3-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018675	(S)-limonene 6-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019113	limonene monooxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019755	one-carbon compound transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0019908	nuclear cyclin-dependent protein kinase holoenzyme complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032497	detection of lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0035834	indole alkaloid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035835	indole alkaloid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0038187	pattern recognition receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046618	xenobiotic export from cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Predict GO terms from Neighborhoods
MF	GO:0062150	amorpha-4,11-diene 12-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070205	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071918	urea transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0097437	maintenance of dormancy	IEP	Predict GO terms from Neighborhoods
MF	GO:0102934	costunolide synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902288	regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:1902290	positive regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:1904383	response to sodium phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	376	431
IPR027417	P-loop_NTPase	32	270
IPR002182	NB-ARC	52	177
IPR002182	NB-ARC	178	256

External Links

No external refs found!

SOLTUB.AGRIA.G00000005723

Expression Profile

Co-expression Networks

Functional Annotation