SOLTUB.AGRIA.G00000005764


Description : Eukaryotic translation initiation factor 4E


Gene families : OG_02_0007841 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005764
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_51

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000005754 No alias Eukaryotic translation initiation factor 4E 0.17 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005754 No alias Eukaryotic translation initiation factor 4E 0.17 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005754 No alias Eukaryotic translation initiation factor 4E 0.17 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
MF GO:0000340 RNA 7-methylguanosine cap binding IEA AHRD
CC GO:0000932 P-body IEA AHRD
BP GO:0001662 behavioral fear response IEA AHRD
MF GO:0003743 translation initiation factor activity IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005845 mRNA cap binding complex IEA AHRD
BP GO:0006413 translational initiation IEA AHRD
BP GO:0006972 hyperosmotic response IEA AHRD
BP GO:0009723 response to ethylene IEA AHRD
BP GO:0009751 response to salicylic acid IEA AHRD
BP GO:0009753 response to jasmonic acid IEA AHRD
CC GO:0010494 cytoplasmic stress granule IEA AHRD
CC GO:0016281 eukaryotic translation initiation factor 4F complex IEA AHRD
CC GO:0016442 RISC complex IEA AHRD
BP GO:0017148 negative regulation of translation IEA AHRD
BP GO:0019827 stem cell population maintenance IEA AHRD
BP GO:0030324 lung development IEA AHRD
MF GO:0031370 eukaryotic initiation factor 4G binding IEA AHRD
CC GO:0033391 chromatoid body IEA AHRD
BP GO:0034059 response to anoxia IEA AHRD
BP GO:0045665 negative regulation of neuron differentiation IEA AHRD
BP GO:0045931 positive regulation of mitotic cell cycle IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
BP GO:0050687 negative regulation of defense response to virus IEA AHRD
BP GO:0071549 cellular response to dexamethasone stimulus IEA AHRD
CC GO:0098978 glutamatergic synapse IEA AHRD
CC GO:0099524 postsynaptic cytosol IEA AHRD
BP GO:0099578 regulation of translation at postsynapse, modulating synaptic transmission IEA AHRD
MF GO:0140297 DNA-binding transcription factor binding IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0000132 establishment of mitotic spindle orientation IEP Predict GO terms from Neighborhoods
CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0000209 protein polyubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0000226 microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0003779 actin binding IEP Predict GO terms from Neighborhoods
MF GO:0003862 3-isopropylmalate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004448 isocitrate dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005938 cell cortex IEP Predict GO terms from Neighborhoods
CC GO:0005962 mitochondrial isocitrate dehydrogenase complex (NAD+) IEP Predict GO terms from Neighborhoods
BP GO:0006066 alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Predict GO terms from Neighborhoods
BP GO:0006102 isocitrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006103 2-oxoglutarate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006551 leucine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006734 NADH metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008652 cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009098 leucine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009692 ethylene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009693 ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009792 embryo development ending in birth or egg hatching IEP Predict GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010942 positive regulation of cell death IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030029 actin filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
CC GO:0030062 mitochondrial tricarboxylic acid cycle enzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0030162 regulation of proteolysis IEP Predict GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0031033 myosin filament organization IEP Predict GO terms from Neighborhoods
BP GO:0031034 myosin filament assembly IEP Predict GO terms from Neighborhoods
CC GO:0031430 M band IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0031674 I band IEP Predict GO terms from Neighborhoods
BP GO:0032006 regulation of TOR signaling IEP Predict GO terms from Neighborhoods
BP GO:0032008 positive regulation of TOR signaling IEP Predict GO terms from Neighborhoods
CC GO:0032154 cleavage furrow IEP Predict GO terms from Neighborhoods
BP GO:0032886 regulation of microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0032887 regulation of spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0032888 regulation of mitotic spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0033500 carbohydrate homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0035925 mRNA 3'-UTR AU-rich region binding IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0036477 somatodendritic compartment IEP Predict GO terms from Neighborhoods
BP GO:0040001 establishment of mitotic spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0042593 glucose homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
BP GO:0043065 positive regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043068 positive regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0043449 cellular alkene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043450 alkene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0045239 tricarboxylic acid cycle enzyme complex IEP Predict GO terms from Neighborhoods
CC GO:0045242 isocitrate dehydrogenase complex (NAD+) IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
MF GO:0051032 nucleic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0051033 RNA transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0051293 establishment of spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0051294 establishment of spindle orientation IEP Predict GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Predict GO terms from Neighborhoods
BP GO:0051653 spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0051656 establishment of organelle localization IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Predict GO terms from Neighborhoods
BP GO:0071688 striated muscle myosin thick filament assembly IEP Predict GO terms from Neighborhoods
BP GO:0072350 tricarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
MF GO:0097602 cullin family protein binding IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
BP GO:0120254 olefinic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0120255 olefinic compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0140666 annealing activity IEP Predict GO terms from Neighborhoods
BP GO:1900673 olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900674 olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902235 regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902237 positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902533 positive regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902652 secondary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903432 regulation of TORC1 signaling IEP Predict GO terms from Neighborhoods
BP GO:1904035 regulation of epithelial cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:1904037 positive regulation of epithelial cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:1904263 positive regulation of TORC1 signaling IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905898 positive regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
BP GO:2000674 regulation of type B pancreatic cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:2000676 positive regulation of type B pancreatic cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:2001233 regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001242 regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001244 positive regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 47 198
IPR023398 TIF_eIF4e-like 24 217
No external refs found!