SOLTUB.AGRIA.G00000005782

Description : Testis-specific Y-encoded-like protein 1

Gene families : OG_02_0007838 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005782
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_106

Type	GO Term	Name	Evidence	Source
BP	GO:0000724	double-strand break repair via homologous recombination	IEA	AHRD
BP	GO:0000725	recombinational repair	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005811	lipid droplet	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008284	positive regulation of cell population proliferation	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010212	response to ionizing radiation	None	Extended
BP	GO:0010332	response to gamma radiation	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016444	somatic cell DNA recombination	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030855	epithelial cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031396	regulation of protein ubiquitination	None	Extended
BP	GO:0031398	positive regulation of protein ubiquitination	IEA	AHRD
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	IEA	AHRD
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034728	nucleosome organization	IEA	AHRD
BP	GO:0040008	regulation of growth	IEA	AHRD
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042393	histone binding	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045446	endothelial cell differentiation	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051896	regulation of protein kinase B signaling	None	Extended
BP	GO:0051897	positive regulation of protein kinase B signaling	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071479	cellular response to ionizing radiation	None	Extended
BP	GO:0071480	cellular response to gamma radiation	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902533	positive regulation of intracellular signal transduction	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000002	mitochondrial genome maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004034	aldose 1-epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004729	oxygen-dependent protoporphyrinogen oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006012	galactose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006772	thiamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006782	protoporphyrinogen IX biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006783	heme biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006808	regulation of nitrogen utilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0009228	thiamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009229	thiamine diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009626	plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010930	negative regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predict GO terms from Neighborhoods
BP	GO:0018131	oxazole or thiazole biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030267	glyoxylate reductase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032006	regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032008	positive regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032497	detection of lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
MF	GO:0032552	deoxyribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032554	purine deoxyribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032558	adenyl deoxyribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032564	dATP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032873	negative regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0034050	programmed cell death induced by symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0034309	primary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034612	response to tumor necrosis factor	IEP	Predict GO terms from Neighborhoods
MF	GO:0038187	pattern recognition receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042357	thiamine diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043154	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046484	oxazole or thiazole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046501	protoporphyrinogen IX metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046975	histone methyltransferase activity (H3-K36 specific)	IEP	Predict GO terms from Neighborhoods
BP	GO:0048578	positive regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051259	protein complex oligomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051607	defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	Predict GO terms from Neighborhoods
MF	GO:0051721	protein phosphatase 2A binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052837	thiazole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052838	thiazole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060632	regulation of microtubule-based movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0061083	regulation of protein refolding	IEP	Predict GO terms from Neighborhoods
BP	GO:0061084	negative regulation of protein refolding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070009	serine-type aminopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070303	negative regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070555	response to interleukin-1	IEP	Predict GO terms from Neighborhoods
MF	GO:0070818	protoporphyrinogen oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090351	seedling development	IEP	Predict GO terms from Neighborhoods
MF	GO:0106345	glyoxylate reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140546	defense response to symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:1902182	shoot apical meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:1903332	regulation of protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:1903333	negative regulation of protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:2000117	negative regulation of cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000243	positive regulation of reproductive process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002164	NAP_family	199	334
IPR037231	NAP-like_sf	134	319

External Links

No external refs found!

SOLTUB.AGRIA.G00000005782

Expression Profile

Co-expression Networks

Functional Annotation