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  5. SOLTUB.AGRIA.G00000005806

SOLTUB.AGRIA.G00000005806


Description : Transposase tnp2


Gene families : OG_02_0025504 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005806
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_70

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000014715 No alias Unknown protein 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018942 No alias Unknown protein 0.07 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000014715 No alias Unknown protein 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018942 No alias Unknown protein 0.07 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000014715 No alias Unknown protein 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018942 No alias Unknown protein 0.07 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0031428 box C/D RNP complex IEP Predict GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034620 cellular response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!