Description : Pectate lyase
Gene families : OG_02_0018595 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005938 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_107 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016829 | lyase activity | IEA | AHRD |
| MF | GO:0030570 | pectate lyase activity | IEA | AHRD |
| BP | GO:0045490 | pectin catabolic process | IEA | AHRD |
| MF | GO:0046872 | metal ion binding | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005770 | late endosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006623 | protein targeting to vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006813 | potassium ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006885 | regulation of pH | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019864 | IgG binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019865 | immunoglobulin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072665 | protein localization to vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072666 | establishment of protein localization to vacuole | IEP | Predict GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007524 | Pec_lyase_N | 29 | 79 |
| No external refs found! |