Description : Nuclear pore complex protein, putative
Gene families : OG_02_0007856 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000005974 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_51 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEA | AHRD |
| CC | GO:0005739 | mitochondrion | IEA | AHRD |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEA | AHRD |
| BP | GO:0010070 | zygote asymmetric cell division | IEA | AHRD |
| BP | GO:0033036 | macromolecule localization | IEA | AHRD |
| BP | GO:0071702 | organic substance transport | IEA | AHRD |
| BP | GO:0071705 | nitrogen compound transport | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000209 | protein polyubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003678 | DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005643 | nuclear pore | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005813 | centrosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005819 | spindle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005829 | cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006260 | DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008238 | exopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008239 | dipeptidyl-peptidase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009504 | cell plate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009692 | ethylene metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009693 | ethylene biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009910 | negative regulation of flower development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010014 | meristem initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010071 | root meristem specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0014069 | postsynaptic density | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015630 | microtubule cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017171 | serine hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019902 | phosphatase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019903 | protein phosphatase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031145 | anaphase-promoting complex-dependent catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032386 | regulation of intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032388 | positive regulation of intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032392 | DNA geometric change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032508 | DNA duplex unwinding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033157 | regulation of intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033233 | regulation of protein sumoylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033234 | negative regulation of protein sumoylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034399 | nuclear periphery | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035925 | mRNA 3'-UTR AU-rich region binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036002 | pre-mRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036292 | DNA rewinding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043449 | cellular alkene metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043450 | alkene biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045840 | positive regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045842 | positive regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045930 | negative regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045931 | positive regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046822 | regulation of nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048443 | stamen development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048829 | root cap development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050657 | nucleic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050658 | RNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050684 | regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051028 | mRNA transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051032 | nucleic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051033 | RNA transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051168 | nuclear export | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051222 | positive regulation of protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051223 | regulation of protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051446 | positive regulation of meiotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051728 | cell cycle switching, mitotic to meiotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051783 | regulation of nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051785 | positive regulation of nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060184 | cell cycle switching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060968 | obsolete regulation of gene silencing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070012 | oligopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070201 | regulation of establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070979 | protein K11-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071103 | DNA conformation change | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0072686 | mitotic spindle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090068 | positive regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090316 | positive regulation of intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090421 | embryonic meristem initiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099572 | postsynaptic specialization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120255 | olefinic compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140666 | annealing activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900673 | olefin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900674 | olefin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901970 | positive regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901989 | positive regulation of cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901992 | positive regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902101 | positive regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903320 | regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903321 | negative regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903829 | positive regulation of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904951 | positive regulation of establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905820 | positive regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990124 | messenger ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000241 | regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |