SOLTUB.AGRIA.G00000006043

Description : 1-aminocyclopropane-1-carboxylate oxidase

Gene families : OG_02_0012738 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006043
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_144

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	IEA	AHRD
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEA	AHRD
BP	GO:0009835	fruit ripening	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0031418	L-ascorbic acid binding	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0048029	monosaccharide binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051213	dioxygenase activity	IEA	AHRD
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071398	cellular response to fatty acid	IEA	AHRD
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004383	guanylate cyclase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005773	vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0006405	RNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006406	mRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006826	iron ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006857	oligopeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006884	cell volume homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008361	regulation of cell size	IEP	Predict GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0009615	response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009751	response to salicylic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009791	post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009799	specification of symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009992	cellular water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010043	response to zinc ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010501	RNA secondary structure unwinding	IEP	Predict GO terms from Neighborhoods
BP	GO:0014070	response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
MF	GO:0015603	iron chelate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031663	lipopolysaccharide-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032392	DNA geometric change	IEP	Predict GO terms from Neighborhoods
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032497	detection of lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0032508	DNA duplex unwinding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Predict GO terms from Neighborhoods
BP	GO:0033212	iron import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0033214	siderophore-dependent iron import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0034755	iron ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035672	oligopeptide transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0038187	pattern recognition receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0048527	lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048528	post-embryonic root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048826	cotyledon morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0051980	iron-nicotianamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055072	iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Predict GO terms from Neighborhoods
BP	GO:0071446	cellular response to salicylic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Predict GO terms from Neighborhoods
BP	GO:0090696	post-embryonic plant organ development	IEP	Predict GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predict GO terms from Neighborhoods
BP	GO:1901678	iron coordination entity transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR026992	DIOX_N	5	94
IPR005123	Oxoglu/Fe-dep_dioxygenase	159	253

External Links

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SOLTUB.AGRIA.G00000006043

Expression Profile

Co-expression Networks

Functional Annotation