SOLTUB.AGRIA.G00000006069


Description : Auxin response factor


Gene families : OG_02_0021671 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006069
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_72


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009638 phototropism IEA AHRD
BP GO:0009723 response to ethylene IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009785 blue light signaling pathway IEA AHRD
BP GO:0009908 flower development IEA AHRD
BP GO:0009942 longitudinal axis specification IEA AHRD
BP GO:0010305 leaf vascular tissue pattern formation IEA AHRD
BP GO:0010311 lateral root formation IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0048366 leaf development IEA AHRD
BP GO:0048507 meristem development IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000076 DNA replication checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
CC GO:0000808 origin recognition complex IEP Predict GO terms from Neighborhoods
CC GO:0000922 spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0001845 phagolysosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
MF GO:0003688 DNA replication origin binding IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005664 nuclear origin of replication recognition complex IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006261 DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006270 DNA replication initiation IEP Predict GO terms from Neighborhoods
BP GO:0006277 DNA amplification IEP Predict GO terms from Neighborhoods
BP GO:0007040 lysosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007260 tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
BP GO:0009566 fertilization IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009629 response to gravity IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009685 gibberellin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009686 gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009734 auxin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009743 response to carbohydrate IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009756 carbohydrate mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009838 abscission IEP Predict GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009911 positive regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0010037 response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0010047 fruit dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010182 sugar mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010227 floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0010385 double-stranded methylated DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:0010972 negative regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0018105 peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018209 peptidyl-serine modification IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
CC GO:0030139 endocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030587 sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030666 endocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031570 DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032465 regulation of cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0032467 positive regulation of cytokinesis IEP Predict GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0033260 nuclear DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0033314 mitotic DNA replication checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034764 positive regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034767 positive regulation of ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042306 regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0043266 regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043268 positive regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043270 positive regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044786 cell cycle DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0044818 mitotic G2/M transition checkpoint IEP Predict GO terms from Neighborhoods
CC GO:0045171 intercellular bridge IEP Predict GO terms from Neighborhoods
CC GO:0045335 phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0045472 response to ether IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045995 regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0048481 plant ovule development IEP Predict GO terms from Neighborhoods
BP GO:0048580 regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048660 regulation of smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048661 positive regulation of smooth muscle cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050829 defense response to Gram-negative bacterium IEP Predict GO terms from Neighborhoods
BP GO:0051049 regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051050 positive regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051222 positive regulation of protein transport IEP Predict GO terms from Neighborhoods
CC GO:0051233 spindle midzone IEP Predict GO terms from Neighborhoods
BP GO:0051302 regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0051781 positive regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0051983 regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0051984 positive regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070316 regulation of G0 to G1 transition IEP Predict GO terms from Neighborhoods
BP GO:0070318 positive regulation of G0 to G1 transition IEP Predict GO terms from Neighborhoods
BP GO:0071244 cellular response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0071897 DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0072686 mitotic spindle IEP Predict GO terms from Neighborhoods
BP GO:0080171 lytic vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0090316 positive regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090333 regulation of stomatal closure IEP Predict GO terms from Neighborhoods
BP GO:0099120 socially cooperative development IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1901379 regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901381 positive regulation of potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901654 response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902750 negative regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903013 response to differentiation-inducing factor 1 IEP Predict GO terms from Neighborhoods
BP GO:1903286 regulation of potassium ion import IEP Predict GO terms from Neighborhoods
BP GO:1903288 positive regulation of potassium ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:1904062 regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904064 positive regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904894 positive regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904951 positive regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 5 47
IPR015300 DNA-bd_pseudobarrel_sf 4 75
IPR010525 ARF_dom 72 131
IPR033389 AUX/IAA_dom 574 615
No external refs found!