SOLTUB.AGRIA.G00000006120


Description : AMP dependent ligase, putative


Gene families : OG_02_0005505 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006120
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9


Type GO Term Name Evidence Source
MF GO:0003987 acetate-CoA ligase activity IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005777 peroxisome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006083 acetate metabolic process IEA AHRD
BP GO:0007623 circadian rhythm IEA AHRD
BP GO:0009723 response to ethylene IEA AHRD
BP GO:0009803 cinnamic acid metabolic process IEA AHRD
BP GO:0010597 green leaf volatile biosynthetic process IEA AHRD
MF GO:0016207 4-coumarate-CoA ligase activity IEA AHRD
MF GO:0018858 benzoate-CoA ligase activity IEA AHRD
BP GO:0019605 butyrate metabolic process IEA AHRD
BP GO:0019761 glucosinolate biosynthetic process IEA AHRD
MF GO:0043759 methylbutanoate-CoA ligase activity IEA AHRD
MF GO:0047760 butyrate-CoA ligase activity IEA AHRD
MF GO:0050218 propionate-CoA ligase activity IEA AHRD
BP GO:0052315 phytoalexin biosynthetic process IEA AHRD
MF GO:0106286 (E)-caffeate-CoA ligase activity IEA AHRD
MF GO:0106290 trans-cinnamate-CoA ligase activity IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0008300 isoprenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009237 siderophore metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009395 phospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009685 gibberellin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009686 gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009710 tropane alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009821 alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009822 alkaloid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0009905 ent-copalyl diphosphate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010476 gibberellin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0016101 diterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016102 diterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016115 terpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predict GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
MF GO:0016872 intramolecular lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019290 siderophore biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033075 isoquinoline alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033076 isoquinoline alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033385 geranylgeranyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033707 3''-deamino-3''-oxonicotianamine reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0034224 cellular response to zinc ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042182 ketone catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046448 tropane alkaloid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047036 codeinone reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
BP GO:0051501 diterpene phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051502 diterpene phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071272 morphine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0097295 morphine biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0106242 kolavenyl diphosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0120127 response to zinc ion starvation IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901376 organic heteropentacyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901378 organic heteropentacyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901867 ecgonine methyl ester metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901868 ecgonine methyl ester catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901869 ecgonine methyl ester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901870 ecgonone methyl ester metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901871 ecgonone methyl ester catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901872 ecgonone methyl ester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901944 miltiradiene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901946 miltiradiene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902241 copal-8-ol diphosphate(3-) metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902243 copal-8-ol diphosphate(3-) biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902247 geranylgeranyl diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1990641 response to iron ion starvation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 73 498
IPR025110 AMP-bd_C 507 581
No external refs found!