SOLTUB.AGRIA.G00000006169


Description : Tetratricopeptide repeat 5


Gene families : OG_02_0005506 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006169
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_198


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006281 DNA repair IEA AHRD
BP GO:0006974 cellular response to DNA damage stimulus IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032076 TTC5_OB 835 941
IPR032076 TTC5_OB 383 478
IPR011990 TPR-like_helical_dom_sf 578 768
IPR011990 TPR-like_helical_dom_sf 152 623
No external refs found!