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  5. SOLTUB.AGRIA.G00000006242

SOLTUB.AGRIA.G00000006242


Description : Laccase


Gene families : OG_02_0012784 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006242
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_66


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009809 lignin biosynthetic process IEA AHRD
BP GO:0009834 plant-type secondary cell wall biogenesis IEA AHRD
BP GO:0046274 lignin catabolic process IEA AHRD
BP GO:0046688 response to copper ion IEA AHRD
CC GO:0048046 apoplast IEA AHRD
CC GO:0048226 Casparian strip IEA AHRD
MF GO:0052716 hydroquinone:oxygen oxidoreductase activity IEA AHRD
BP GO:0080022 primary root development IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004567 beta-mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004630 phospholipase D activity IEP Predict GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005764 lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006808 regulation of nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0006809 nitric oxide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009310 amine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009411 response to UV IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
CC GO:0009531 secondary cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009609 response to symbiotic bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009735 response to cytokinin IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009828 plant-type cell wall loosening IEP Predict GO terms from Neighborhoods
BP GO:0009830 cell wall modification involved in abscission IEP Predict GO terms from Neighborhoods
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010015 root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010047 fruit dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010101 post-embryonic root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010102 lateral root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010103 stomatal complex morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010150 leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:0010191 mucilage metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010224 response to UV-B IEP Predict GO terms from Neighborhoods
CC GO:0010282 senescence-associated vacuole IEP Predict GO terms from Neighborhoods
MF GO:0010283 pinoresinol reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0010284 lariciresinol reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0010297 heteropolysaccharide binding IEP Predict GO terms from Neighborhoods
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predict GO terms from Neighborhoods
BP GO:0010383 cell wall polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010410 hemicellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010412 mannan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010455 positive regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010623 programmed cell death involved in cell development IEP Predict GO terms from Neighborhoods
BP GO:0010726 positive regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010728 regulation of hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010729 positive regulation of hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010981 regulation of cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016985 mannan endo-1,4-beta-mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
BP GO:0031155 regulation of reproductive fruiting body development IEP Predict GO terms from Neighborhoods
MF GO:0031176 endo-1,4-beta-xylanase activity IEP Predict GO terms from Neighborhoods
BP GO:0032106 positive regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032109 positive regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0034309 primary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034310 primary alcohol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034311 diol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034312 diol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034638 phosphatidylcholine catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0043102 amino acid salvage IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044277 cell wall disassembly IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045491 xylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045493 xylan catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0045848 positive regulation of nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0046173 polyol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046209 nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046273 lignan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046466 membrane lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046475 glycerophospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046662 regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0048521 negative regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0048759 xylem vessel member cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048829 root cap development IEP Predict GO terms from Neighborhoods
MF GO:0050268 coniferyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051791 medium-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0052597 diamine oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0052747 sinapyl alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071265 L-methionine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071267 L-methionine salvage IEP Predict GO terms from Neighborhoods
BP GO:0071281 cellular response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
CC GO:0071944 cell periphery IEP Predict GO terms from Neighborhoods
BP GO:0075260 regulation of spore-bearing organ development IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080187 floral organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090058 metaxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090059 protoxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090333 regulation of stomatal closure IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0090400 stress-induced premature senescence IEP Predict GO terms from Neighborhoods
BP GO:0090601 enucleation IEP Predict GO terms from Neighborhoods
BP GO:0090602 sieve element enucleation IEP Predict GO terms from Neighborhoods
BP GO:0090626 plant epidermis morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090698 post-embryonic plant morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0097007 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0097008 (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0097184 response to azide IEP Predict GO terms from Neighborhoods
BP GO:0097185 cellular response to azide IEP Predict GO terms from Neighborhoods
BP GO:0097264 self proteolysis IEP Predict GO terms from Neighborhoods
MF GO:0097599 xylanase activity IEP Predict GO terms from Neighborhoods
MF GO:0097655 serpin family protein binding IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
MF GO:0106144 fraxetin 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106146 sideretin biosynthesis IEP Predict GO terms from Neighborhoods
MF GO:0106149 indole-3-carbonyl nitrile 4-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:1901045 negative regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901502 ether catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901503 ether biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901598 (-)-pinoresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902123 (-)-pinoresinol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902124 (+)-pinoresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902125 (+)-pinoresinol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902127 (-)-lariciresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902128 (-)-lariciresinol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902129 (-)-lariciresinol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902130 (+)-lariciresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902131 (+)-lariciresinol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902132 (+)-lariciresinol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902133 (+)-secoisolariciresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902135 (+)-secoisolariciresinol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902136 (-)-secoisolariciresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902138 (-)-secoisolariciresinol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902265 abscisic acid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:1903340 positive regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903428 positive regulation of reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904248 regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904250 positive regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1990059 fruit valve development IEP Predict GO terms from Neighborhoods
BP GO:1990169 stress response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:2000895 hemicellulose catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_N 37 150
IPR017761 Laccase 237 594
IPR008972 Cupredoxin 30 174
IPR001117 Cu-oxidase 164 344
IPR011706 Cu-oxidase_C 444 576
IPR008972 Cupredoxin 157 367
IPR008972 Cupredoxin 385 594
No external refs found!