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  5. SOLTUB.AGRIA.G00000000057

SOLTUB.AGRIA.G00000000057


Description : Disease resistance protein (CC-NBS-LRR class) family


Gene families : OG_02_0000310 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000057
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_99

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000000115 No alias Disease resistance protein (CC-NBS-LRR class) family 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000115 No alias Disease resistance protein (CC-NBS-LRR class) family 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000115 No alias Disease resistance protein (CC-NBS-LRR class) family 0.14 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
BP GO:0098542 defense response to other organism IEA AHRD
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002221 pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010337 regulation of salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019217 regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030957 Tat protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0060860 regulation of floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0060862 negative regulation of floral organ abscission IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900426 positive regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902456 regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902458 positive regulation of stomatal opening IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 157 395
IPR027417 P-loop_NTPase 142 407
No external refs found!