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  5. SOLTUB.AGRIA.G00000006521

SOLTUB.AGRIA.G00000006521


Description : Protein rik


Gene families : OG_02_0012808 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006521
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_74


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0006397 mRNA processing IEA AHRD
BP GO:0008380 RNA splicing IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0000226 microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000430 regulation of transcription from RNA polymerase II promoter by glucose IEP Predict GO terms from Neighborhoods
BP GO:0000433 carbon catabolite repression of transcription from RNA polymerase II promoter by glucose IEP Predict GO terms from Neighborhoods
CC GO:0000776 kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0001570 vasculogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001578 microtubule bundle formation IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0002225 positive regulation of antimicrobial peptide production IEP Predict GO terms from Neighborhoods
BP GO:0002697 regulation of immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0002699 positive regulation of immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0002700 regulation of production of molecular mediator of immune response IEP Predict GO terms from Neighborhoods
BP GO:0002702 positive regulation of production of molecular mediator of immune response IEP Predict GO terms from Neighborhoods
BP GO:0002759 regulation of antimicrobial humoral response IEP Predict GO terms from Neighborhoods
BP GO:0002760 positive regulation of antimicrobial humoral response IEP Predict GO terms from Neighborhoods
BP GO:0002784 regulation of antimicrobial peptide production IEP Predict GO terms from Neighborhoods
BP GO:0002920 regulation of humoral immune response IEP Predict GO terms from Neighborhoods
BP GO:0002922 positive regulation of humoral immune response IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004707 MAP kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004714 transmembrane receptor protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004715 non-membrane spanning protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005539 glycosaminoglycan binding IEP Predict GO terms from Neighborhoods
BP GO:0006111 regulation of gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007088 regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007346 regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007350 blastoderm segmentation IEP Predict GO terms from Neighborhoods
BP GO:0007420 brain development IEP Predict GO terms from Neighborhoods
BP GO:0007519 skeletal muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007548 sex differentiation IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008201 heparin binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008592 regulation of Toll signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0010212 response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010508 positive regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010564 regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010656 negative regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010660 regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010662 regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010664 negative regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010665 regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010667 negative regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010677 negative regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010906 regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010948 negative regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:0010976 positive regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014015 positive regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014028 notochord formation IEP Predict GO terms from Neighborhoods
BP GO:0014866 skeletal myofibril assembly IEP Predict GO terms from Neighborhoods
BP GO:0018107 peptidyl-threonine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018210 peptidyl-threonine modification IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0018993 somatic sex determination IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0030239 myofibril assembly IEP Predict GO terms from Neighborhoods
BP GO:0031032 actomyosin structure organization IEP Predict GO terms from Neighborhoods
BP GO:0031109 microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0032526 response to retinoic acid IEP Predict GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0042051 compound eye photoreceptor development IEP Predict GO terms from Neighborhoods
BP GO:0042461 photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042462 eye photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042552 myelination IEP Predict GO terms from Neighborhoods
BP GO:0042759 long-chain fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0043622 cortical microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0045013 carbon catabolite repression of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045014 carbon catabolite repression of transcription by glucose IEP Predict GO terms from Neighborhoods
CC GO:0045111 intermediate filament cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0045685 regulation of glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045687 positive regulation of glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045721 negative regulation of gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045752 positive regulation of Toll signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045786 negative regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0046015 regulation of transcription by glucose IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046785 microtubule polymerization IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048255 mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048581 negative regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
BP GO:0048713 regulation of oligodendrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048714 positive regulation of oligodendrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051093 negative regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051258 protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051983 regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0060034 notochord cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060537 muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0061984 catabolite repression IEP Predict GO terms from Neighborhoods
BP GO:0061985 carbon catabolite repression IEP Predict GO terms from Neighborhoods
BP GO:0061986 negative regulation of transcription by glucose IEP Predict GO terms from Neighborhoods
BP GO:0061987 negative regulation of transcription from RNA polymerase II promoter by glucose IEP Predict GO terms from Neighborhoods
BP GO:0062014 negative regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0070935 3'-UTR-mediated mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0090307 mitotic spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0090601 enucleation IEP Predict GO terms from Neighborhoods
BP GO:0090602 sieve element enucleation IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1900063 regulation of peroxisome organization IEP Predict GO terms from Neighborhoods
BP GO:1900064 positive regulation of peroxisome organization IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901987 regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902373 negative regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902806 regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902807 negative regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905936 regulation of germ cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:1905937 negative regulation of germ cell proliferation IEP Predict GO terms from Neighborhoods
CC GO:1990047 spindle matrix IEP Predict GO terms from Neighborhoods
BP GO:2000045 regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:2000134 negative regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000242 negative regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000254 regulation of male germ cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000255 negative regulation of male germ cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036612 KH_dom_type_1_sf 206 293
No external refs found!