SOLTUB.AGRIA.G00000006746

Description : Pectin lyase-like superfamily protein

Gene families : OG_02_0012836 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006746
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_156

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009556	microsporogenesis	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	IEA	AHRD
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034293	sexual sporulation	None	Extended
BP	GO:0043934	sporulation	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048236	plant-type sporogenesis	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0051321	meiotic cell cycle	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	IEA	AHRD
BP	GO:1903046	meiotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048608	reproductive structure development	IEP	Predict GO terms from Neighborhoods
CC	GO:0071944	cell periphery	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011050	Pectin_lyase_fold/virulence	69	450
IPR024535	Pectate_lyase_SF_prot	78	299

External Links

No external refs found!

SOLTUB.AGRIA.G00000006746

Expression Profile

Co-expression Networks

Functional Annotation