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  5. SOLTUB.AGRIA.G00000006843

SOLTUB.AGRIA.G00000006843


Description : Unknown protein


Gene families : OG_02_0000001 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006843
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_175

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000001793 No alias Replication protein A 70 kDa DNA-binding subunit B 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001793 No alias Replication protein A 70 kDa DNA-binding subunit B 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001793 No alias Replication protein A 70 kDa DNA-binding subunit B 0.03 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002221 pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0004713 protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009595 detection of biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009902 chloroplast relocation IEP Predict GO terms from Neighborhoods
BP GO:0009904 chloroplast accumulation movement IEP Predict GO terms from Neighborhoods
BP GO:0010017 red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010161 red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0032490 detection of molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0032496 response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0032497 detection of lipopolysaccharide IEP Predict GO terms from Neighborhoods
MF GO:0038187 pattern recognition receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0048576 positive regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051667 establishment of plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0071446 cellular response to salicylic acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071489 cellular response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0071491 cellular response to red light IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
BP GO:0098581 detection of external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 18 130
IPR012340 NA-bd_OB-fold 17 116
No external refs found!