SOLTUB.AGRIA.G00000006957

Description : FAD-binding Berberine family protein

Gene families : OG_02_0031678 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006957
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_113

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001666	response to hypoxia	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	None	Extended
BP	GO:0010726	positive regulation of hydrogen peroxide metabolic process	None	Extended
BP	GO:0010728	regulation of hydrogen peroxide biosynthetic process	None	Extended
BP	GO:0010729	positive regulation of hydrogen peroxide biosynthetic process	IEA	AHRD
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0071949	FAD binding	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901696	cannabinoid biosynthetic process	IEA	AHRD
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:1903428	positive regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004364	glutathione transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004557	alpha-galactosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005274	allantoin:proton symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005350	pyrimidine nucleobase transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005987	sucrose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006012	galactose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006450	regulation of translational fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006591	ornithine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007424	open tracheal system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008655	pyrimidine-containing compound salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009313	oligosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009635	response to herbicide	IEP	Predict GO terms from Neighborhoods
BP	GO:0009636	response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009846	pollen germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0009969	xyloglucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010249	auxin conjugate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015140	malate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015210	uracil transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015391	nucleobase:cation symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015505	uracil:cation symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015720	allantoin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015855	pyrimidine nucleobase transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015857	uracil transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016046	detection of fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predict GO terms from Neighborhoods
BP	GO:0018874	benzoate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019320	hexose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019388	galactose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019478	D-amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030027	lamellipodium	IEP	Predict GO terms from Neighborhoods
MF	GO:0031210	phosphatidylcholine binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031256	leading edge membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033358	UDP-L-arabinose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033499	galactose catabolic process via UDP-galactose	IEP	Predict GO terms from Neighborhoods
BP	GO:0033531	stachyose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033532	stachyose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042906	xanthine transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042907	xanthine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043100	pyrimidine nucleobase salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045226	extracellular polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045227	capsule polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045230	capsule organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045487	gibberellin catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046352	disaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046365	monosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046379	extracellular polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046416	D-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047268	galactinol-raffinose galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047274	galactinol-sucrose galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048030	disaccharide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050268	coniferyl-alcohol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050373	UDP-arabinose 4-epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051058	negative regulation of small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0051499	D-aminoacyl-tRNA deacylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052318	regulation of phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052319	regulation of phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052320	positive regulation of phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052322	positive regulation of phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052575	carbohydrate localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0052576	carbohydrate storage	IEP	Predict GO terms from Neighborhoods
MF	GO:0052625	4-aminobenzoate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052626	benzoate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052627	vanillate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052628	4-hydroxybenzoate amino acid synthetase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060541	respiratory system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061615	glycolytic process through fructose-6-phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:0061620	glycolytic process through glucose-6-phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:0061622	glycolytic process through glucose-1-phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:0061623	glycolytic process from galactose	IEP	Predict GO terms from Neighborhoods
MF	GO:0070406	glutamine binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070492	oligosaccharide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071423	malate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071836	nectar secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0072531	pyrimidine-containing compound transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080154	regulation of fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0080167	response to karrikin	IEP	Predict GO terms from Neighborhoods
MF	GO:0090599	alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102111	gibberellin A20,2-oxoglutarate:oxygen oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102652	gibberellin A9,2-oxoglutarate:oxygen oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102924	gibberellin A44,2-oxoglutarate:oxygen oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140042	lipid droplet formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901182	regulation of camalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901183	positive regulation of camalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903173	fatty alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903175	fatty alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903791	uracil transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904082	pyrimidine nucleobase transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1990450	linear polyubiquitin binding	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	75	188
IPR036318	FAD-bd_PCMH-like_sf	24	185

External Links

No external refs found!

SOLTUB.AGRIA.G00000006957

Expression Profile

Co-expression Networks

Functional Annotation