Description : Pectate lyase
Gene families : OG_02_0042943 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007029 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_35 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEA | AHRD |
| CC | GO:0005739 | mitochondrion | IEA | AHRD |
| BP | GO:0009416 | response to light stimulus | IEA | AHRD |
| CC | GO:0009522 | photosystem I | IEA | AHRD |
| CC | GO:0009523 | photosystem II | IEA | AHRD |
| CC | GO:0009535 | chloroplast thylakoid membrane | IEA | AHRD |
| BP | GO:0009768 | photosynthesis, light harvesting in photosystem I | IEA | AHRD |
| CC | GO:0009941 | chloroplast envelope | IEA | AHRD |
| CC | GO:0010287 | plastoglobule | IEA | AHRD |
| CC | GO:0016021 | integral component of membrane | IEA | AHRD |
| MF | GO:0016168 | chlorophyll binding | IEA | AHRD |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEA | AHRD |
| MF | GO:0019904 | protein domain specific binding | IEA | AHRD |
| MF | GO:0046872 | metal ion binding | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000722 | telomere maintenance via recombination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004316 | 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004373 | glycogen (starch) synthase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005662 | DNA replication factor A complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005997 | xylulose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006265 | DNA topological change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006268 | DNA unwinding involved in DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006278 | RNA-templated DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006312 | mitotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006768 | biotin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006772 | thiamine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006782 | protoporphyrinogen IX biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007004 | telomere maintenance via telomerase | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007127 | meiosis I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007141 | male meiosis I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008874 | gluconate 5-dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008875 | gluconate dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009011 | starch synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009102 | biotin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009501 | amyloplast | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009503 | thylakoid light-harvesting complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009517 | PSII associated light-harvesting complex II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009644 | response to high light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009645 | response to low light intensity stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009769 | photosynthesis, light harvesting in photosystem II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009782 | photosystem I antenna complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010021 | amylopectin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010833 | telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016054 | organic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016744 | transketolase or transaldolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019171 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019252 | starch biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019321 | pentose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019520 | aldonic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019523 | L-idonate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030076 | light-harvesting complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030491 | heteroduplex formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030497 | fatty acid elongation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031409 | pigment binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033201 | alpha-1,4-glucan synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034309 | primary alcohol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042162 | telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043047 | single-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046176 | aldonic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046183 | L-idonate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046501 | protoporphyrinogen IX metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050661 | NADP binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051026 | chiasma assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052863 | 1-deoxy-D-xylulose 5-phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052865 | 1-deoxy-D-xylulose 5-phosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098807 | chloroplast thylakoid membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0098847 | sequence-specific single stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903428 | positive regulation of reactive oxygen species biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000896 | amylopectin metabolic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |