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  5. SOLTUB.AGRIA.G00000007059

SOLTUB.AGRIA.G00000007059


Description : Elongation factor 1-alpha


Gene families : OG_02_0000480 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007059
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0003746 translation elongation factor activity IEA AHRD
MF GO:0003924 GTPase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005525 GTP binding IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006414 translational elongation IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000070 mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
BP GO:0000819 sister chromatid segregation IEP Predict GO terms from Neighborhoods
MF GO:0004142 diacylglycerol cholinephosphotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004307 ethanolaminephosphotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0006646 phosphatidylethanolamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006656 phosphatidylcholine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006657 CDP-choline pathway IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Predict GO terms from Neighborhoods
BP GO:0009798 axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predict GO terms from Neighborhoods
MF GO:0017169 CDP-alcohol phosphatidyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0032886 regulation of microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0045324 late endosome to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0046337 phosphatidylethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046470 phosphatidylcholine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046910 pectinesterase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:1902066 regulation of cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 11 79
IPR009001 Transl_elong_EF1A/Init_IF2_C 9 79
No external refs found!