1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000007092

SOLTUB.AGRIA.G00000007092


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG_02_0004416 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007092
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_113


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005768 endosome IEA AHRD
BP GO:0006810 transport IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0050794 regulation of cellular process IEA AHRD
BP GO:0050896 response to stimulus IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predict GO terms from Neighborhoods
MF GO:0005253 anion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005274 allantoin:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005350 pyrimidine nucleobase transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006450 regulation of translational fidelity IEP Predict GO terms from Neighborhoods
BP GO:0006591 ornithine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006863 purine nucleobase transport IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0007424 open tracheal system development IEP Predict GO terms from Neighborhoods
BP GO:0008655 pyrimidine-containing compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0009635 response to herbicide IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0010023 proanthocyanidin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010249 auxin conjugate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010726 positive regulation of hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010728 regulation of hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010729 positive regulation of hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015140 malate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015205 nucleobase transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015210 uracil transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015391 nucleobase:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015505 uracil:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015720 allantoin transport IEP Predict GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Predict GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Predict GO terms from Neighborhoods
BP GO:0015851 nucleobase transport IEP Predict GO terms from Neighborhoods
BP GO:0015855 pyrimidine nucleobase transport IEP Predict GO terms from Neighborhoods
BP GO:0015857 uracil transport IEP Predict GO terms from Neighborhoods
BP GO:0016046 detection of fungus IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016103 diterpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016208 AMP binding IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0018874 benzoate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019478 D-amino acid catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030027 lamellipodium IEP Predict GO terms from Neighborhoods
MF GO:0031210 phosphatidylcholine binding IEP Predict GO terms from Neighborhoods
CC GO:0031256 leading edge membrane IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042906 xanthine transport IEP Predict GO terms from Neighborhoods
MF GO:0042907 xanthine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0043100 pyrimidine nucleobase salvage IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045487 gibberellin catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0046244 salicylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046416 D-amino acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0048030 disaccharide binding IEP Predict GO terms from Neighborhoods
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0050268 coniferyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Predict GO terms from Neighborhoods
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051176 positive regulation of sulfur metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predict GO terms from Neighborhoods
BP GO:0052318 regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052319 regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052320 positive regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052322 positive regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0052625 4-aminobenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052626 benzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052627 vanillate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052628 4-hydroxybenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0060541 respiratory system development IEP Predict GO terms from Neighborhoods
MF GO:0070406 glutamine binding IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
MF GO:0070492 oligosaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071272 morphine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071423 malate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Predict GO terms from Neighborhoods
BP GO:0072531 pyrimidine-containing compound transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Predict GO terms from Neighborhoods
BP GO:0080154 regulation of fertilization IEP Predict GO terms from Neighborhoods
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0097237 cellular response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0097295 morphine biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0102111 gibberellin A20,2-oxoglutarate:oxygen oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0102652 gibberellin A9,2-oxoglutarate:oxygen oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0102802 thebaine 6-O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102805 codeine O-demethylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102924 gibberellin A44,2-oxoglutarate:oxygen oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEP Predict GO terms from Neighborhoods
MF GO:0120091 jasmonic acid hydrolase IEP Predict GO terms from Neighborhoods
BP GO:0140042 lipid droplet formation IEP Predict GO terms from Neighborhoods
BP GO:1900366 negative regulation of defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:1901182 regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901183 positive regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901696 cannabinoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903173 fatty alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903175 fatty alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903426 regulation of reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903428 positive regulation of reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903791 uracil transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904082 pyrimidine nucleobase transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1990450 linear polyubiquitin binding IEP Predict GO terms from Neighborhoods
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000379 positive regulation of reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035969 Rab-GTPase_TBC_sf 109 354
IPR000195 Rab-GTPase-TBC_dom 131 395
No external refs found!