SOLTUB.AGRIA.G00000007275

Description : Sodium/calcium exchanger family protein / calcium-binding EF hand family protein, putative

Gene families : OG_02_0001776 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007275
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_218

Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005432	calcium:sodium antiporter activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006816	calcium ion transport	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015081	sodium ion transmembrane transporter activity	None	Extended
MF	GO:0015085	calcium ion transmembrane transporter activity	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	None	Extended
MF	GO:0015298	solute:cation antiporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015368	calcium:cation antiporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	IEA	AHRD
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEA	AHRD
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	IEA	AHRD
BP	GO:0098771	inorganic ion homeostasis	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0005261	cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006275	regulation of DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006723	cuticle hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009612	response to mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009617	response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009828	plant-type cell wall loosening	IEP	Predict GO terms from Neighborhoods
BP	GO:0009913	epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010088	phloem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030855	epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032182	ubiquitin-like protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032875	regulation of DNA endoreduplication	IEP	Predict GO terms from Neighborhoods
BP	GO:0036473	cell death in response to oxidative stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0038023	signaling receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	IEP	Predict GO terms from Neighborhoods
MF	GO:0043130	ubiquitin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043473	pigmentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043476	pigment accumulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0043480	pigment accumulation in tissues	IEP	Predict GO terms from Neighborhoods
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0046620	regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046621	negative regulation of organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048469	cell maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048482	plant ovule morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048497	maintenance of floral organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048638	regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048640	negative regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048764	trichoblast maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048765	root hair cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050982	detection of mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051093	negative regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0060089	molecular transducer activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080050	regulation of seed development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080113	regulation of seed growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0090700	maintenance of plant organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:1900057	positive regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000033	regulation of seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000034	regulation of seed maturation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004837	NaCa_Exmemb	76	255
IPR004837	NaCa_Exmemb	574	718
IPR002048	EF_hand_dom	452	518
IPR011992	EF-hand-dom_pair	310	520

External Links

No external refs found!

SOLTUB.AGRIA.G00000007275

Expression Profile

Co-expression Networks

Functional Annotation