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  5. SOLTUB.AGRIA.G00000007503

SOLTUB.AGRIA.G00000007503


Description : Cyclin d, putative


Gene families : OG_02_0012981 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007503
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_142


Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009735 response to cytokinin IEA AHRD
BP GO:0009744 response to sucrose IEA AHRD
BP GO:0010444 guard mother cell differentiation IEA AHRD
BP GO:0048316 seed development IEA AHRD
BP GO:0050789 regulation of biological process IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
MF GO:0001664 G protein-coupled receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0001817 regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005102 signaling receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005246 calcium channel regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005640 nuclear outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0005938 cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0006611 protein export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0007600 sensory perception IEP Predict GO terms from Neighborhoods
BP GO:0007601 visual perception IEP Predict GO terms from Neighborhoods
BP GO:0007602 phototransduction IEP Predict GO terms from Neighborhoods
MF GO:0008139 nuclear localization sequence binding IEP Predict GO terms from Neighborhoods
BP GO:0008594 photoreceptor cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009583 detection of light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009612 response to mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009642 response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0009646 response to absence of light IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
CC GO:0009898 cytoplasmic side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009909 regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010574 regulation of vascular endothelial growth factor production IEP Predict GO terms from Neighborhoods
BP GO:0010649 regulation of cell communication by electrical coupling IEP Predict GO terms from Neighborhoods
BP GO:0010651 negative regulation of cell communication by electrical coupling IEP Predict GO terms from Neighborhoods
BP GO:0010959 regulation of metal ion transport IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Predict GO terms from Neighborhoods
MF GO:0016247 channel regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Predict GO terms from Neighborhoods
MF GO:0019904 protein domain specific binding IEP Predict GO terms from Neighborhoods
BP GO:0022898 regulation of transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0030141 secretory granule IEP Predict GO terms from Neighborhoods
BP GO:0030182 neuron differentiation IEP Predict GO terms from Neighborhoods
CC GO:0030424 axon IEP Predict GO terms from Neighborhoods
CC GO:0030425 dendrite IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
MF GO:0031800 type 3 metabotropic glutamate receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0031965 nuclear membrane IEP Predict GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0032386 regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032387 negative regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032409 regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032410 negative regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032879 regulation of localization IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0034330 cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:0034762 regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034763 negative regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034765 regulation of ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034766 negative regulation of ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0035254 glutamate receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0035256 G protein-coupled glutamate receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Predict GO terms from Neighborhoods
BP GO:0042306 regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042308 negative regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042461 photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042462 eye photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042542 response to hydrogen peroxide IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
CC GO:0043025 neuronal cell body IEP Predict GO terms from Neighborhoods
BP GO:0043086 negative regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0043269 regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043271 negative regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Predict GO terms from Neighborhoods
CC GO:0044280 subplasmalemmal coating IEP Predict GO terms from Neighborhoods
CC GO:0044297 cell body IEP Predict GO terms from Neighborhoods
MF GO:0044325 transmembrane transporter binding IEP Predict GO terms from Neighborhoods
CC GO:0044613 nuclear pore central transport channel IEP Predict GO terms from Neighborhoods
CC GO:0045202 synapse IEP Predict GO terms from Neighborhoods
BP GO:0046549 retinal cone cell development IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046823 negative regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0048167 regulation of synaptic plasticity IEP Predict GO terms from Neighborhoods
MF GO:0048306 calcium-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048571 long-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048574 long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
BP GO:0048667 cell morphogenesis involved in neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048831 regulation of shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0050804 modulation of chemical synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0050808 synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0050877 nervous system process IEP Predict GO terms from Neighborhoods
BP GO:0050953 sensory perception of light stimulus IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051049 regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051050 positive regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051051 negative regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0051222 positive regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051224 negative regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051924 regulation of calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0051926 negative regulation of calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0060040 retinal bipolar neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0080164 regulation of nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090204 protein localization to nuclear pore IEP Predict GO terms from Neighborhoods
BP GO:0090316 positive regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090435 protein localization to nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098562 cytoplasmic side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098793 presynapse IEP Predict GO terms from Neighborhoods
BP GO:0098885 modification of postsynaptic actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0098926 postsynaptic signal transduction IEP Predict GO terms from Neighborhoods
CC GO:0098978 glutamatergic synapse IEP Predict GO terms from Neighborhoods
BP GO:0099010 modification of postsynaptic structure IEP Predict GO terms from Neighborhoods
MF GO:0099106 ion channel regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0099177 regulation of trans-synaptic signaling IEP Predict GO terms from Neighborhoods
CC GO:0099503 secretory vesicle IEP Predict GO terms from Neighborhoods
BP GO:0099527 postsynapse to nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0099563 modification of synaptic structure IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
CC GO:0099573 glutamatergic postsynaptic density IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900181 negative regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1901019 regulation of calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901020 negative regulation of calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901385 regulation of voltage-gated calcium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1901386 negative regulation of voltage-gated calcium channel activity IEP Predict GO terms from Neighborhoods
BP GO:1903169 regulation of calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903170 negative regulation of calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903828 negative regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1903829 positive regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1904046 negative regulation of vascular endothelial growth factor production IEP Predict GO terms from Neighborhoods
BP GO:1904062 regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904063 negative regulation of cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904950 negative regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1904951 positive regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905539 regulation of postsynapse to nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1905962 glutamatergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:2001257 regulation of cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:2001258 negative regulation of cation channel activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036915 Cyclin-like_sf 128 250
IPR036915 Cyclin-like_sf 8 144
IPR006671 Cyclin_N 27 144
IPR004367 Cyclin_C-dom 147 240
No external refs found!