SOLTUB.AGRIA.G00000007522

Description : FAD-binding Berberine family protein, putative

Gene families : OG_02_0012983 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007522
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	None	Extended
BP	GO:0010726	positive regulation of hydrogen peroxide metabolic process	None	Extended
BP	GO:0010728	regulation of hydrogen peroxide biosynthetic process	None	Extended
BP	GO:0010729	positive regulation of hydrogen peroxide biosynthetic process	IEA	AHRD
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
MF	GO:0050268	coniferyl-alcohol dehydrogenase activity	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901696	cannabinoid biosynthetic process	IEA	AHRD
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:1903428	positive regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000469	cleavage involved in rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000478	endonucleolytic cleavage involved in rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0002103	endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	IEP	Predict GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004825	methionine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006356	regulation of transcription by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006431	methionyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006839	mitochondrial transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predict GO terms from Neighborhoods
CC	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0017102	methionyl glutamyl tRNA synthetase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0032868	response to insulin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032869	cellular response to insulin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0036119	response to platelet-derived growth factor	IEP	Predict GO terms from Neighborhoods
BP	GO:0036120	cellular response to platelet-derived growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045943	positive regulation of transcription by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070585	protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0070849	response to epidermal growth factor	IEP	Predict GO terms from Neighborhoods
BP	GO:0071364	cellular response to epidermal growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071375	cellular response to peptide hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
CC	GO:0097255	R2TP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0140747	regulation of ncRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1901836	regulation of transcription of nucleolar large rRNA by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:1901838	positive regulation of transcription of nucleolar large rRNA by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	70	206
IPR012951	BBE	475	530
IPR036318	FAD-bd_PCMH-like_sf	63	240

External Links

No external refs found!

SOLTUB.AGRIA.G00000007522

Expression Profile

Co-expression Networks

Functional Annotation