SOLTUB.AGRIA.G00000007749

Description : Ubiquitin carboxyl-terminal hydrolase family protein

Gene families : OG_02_0008055 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007749
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008285	negative regulation of cell population proliferation	IEA	AHRD
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010015	root morphogenesis	None	Extended
BP	GO:0010101	post-embryonic root morphogenesis	None	Extended
BP	GO:0010102	lateral root morphogenesis	IEA	AHRD
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090697	post-embryonic plant organ morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000372	Group I intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000373	Group II intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predict GO terms from Neighborhoods
BP	GO:0000376	RNA splicing, via transesterification reactions with guanosine as nucleophile	IEP	Predict GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predict GO terms from Neighborhoods
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000963	mitochondrial RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0002684	positive regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002694	regulation of leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002696	positive regulation of leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006598	polyamine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008284	positive regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Predict GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009310	amine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009553	embryo sac development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010467	gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0022407	regulation of cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0022409	positive regulation of cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0030155	regulation of cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0031426	polycistronic mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032944	regulation of mononuclear cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032946	positive regulation of mononuclear cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033500	carbohydrate homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0034038	deoxyhypusine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042102	positive regulation of T cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042129	regulation of T cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042593	glucose homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044106	cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045785	positive regulation of cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046203	spermidine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048316	seed development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050514	homospermidine synthase (spermidine-specific) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050670	regulation of lymphocyte proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050671	positive regulation of lymphocyte proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050863	regulation of T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050865	regulation of cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050867	positive regulation of cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050870	positive regulation of T cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051249	regulation of lymphocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051251	positive regulation of lymphocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070663	regulation of leukocyte proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070665	positive regulation of leukocyte proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090615	mitochondrial mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0140040	mitochondrial polycistronic RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0140053	mitochondrial gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:1903037	regulation of leukocyte cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:1903039	positive regulation of leukocyte cell-cell adhesion	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021099	PORR_domain	34	376

External Links

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SOLTUB.AGRIA.G00000007749

Expression Profile

Co-expression Networks

Functional Annotation