SOLTUB.AGRIA.G00000007980

Description : Rac-like gtp-binding protein rho1

Gene families : OG_02_0033535 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007980
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_406

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005525	GTP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005737	cytoplasm	None	Extended
CC	GO:0005819	spindle	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005938	cell cortex	IEA	AHRD
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007163	establishment or maintenance of cell polarity	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	AHRD
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008360	regulation of cell shape	IEA	AHRD
CC	GO:0009505	plant-type cell wall	None	Extended
CC	GO:0009524	phragmoplast	IEA	AHRD
CC	GO:0009531	secondary cell wall	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009834	plant-type secondary cell wall biogenesis	None	Extended
BP	GO:0009860	pollen tube growth	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009958	positive gravitropism	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEA	AHRD
BP	GO:0010962	regulation of glucan biosynthetic process	None	Extended
BP	GO:0010981	regulation of cell wall macromolecule metabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0017157	regulation of exocytosis	IEA	AHRD
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0019003	GDP binding	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	AHRD
MF	GO:0019902	phosphatase binding	None	Extended
MF	GO:0019903	protein phosphatase binding	IEA	AHRD
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0030427	site of polarized growth	IEA	AHRD
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	IEA	AHRD
BP	GO:0030834	regulation of actin filament depolymerization	IEA	AHRD
BP	GO:0030865	cortical cytoskeleton organization	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0032794	GTPase activating protein binding	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
BP	GO:0032885	regulation of polysaccharide biosynthetic process	None	Extended
BP	GO:0032950	regulation of beta-glucan metabolic process	None	Extended
BP	GO:0032951	regulation of beta-glucan biosynthetic process	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
CC	GO:0042995	cell projection	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0043255	regulation of carbohydrate biosynthetic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
CC	GO:0045177	apical part of cell	IEA	AHRD
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048766	root hair initiation	IEA	AHRD
BP	GO:0048767	root hair elongation	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051046	regulation of secretion	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051648	vesicle localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051650	establishment of vesicle localization	IEA	AHRD
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090379	secondary cell wall biogenesis involved in seed trichome differentiation	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901420	negative regulation of response to alcohol	None	Extended
BP	GO:1901879	regulation of protein depolymerization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1903530	regulation of secretion by cell	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
BP	GO:1905958	negative regulation of cellular response to alcohol	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001006	regulation of cellulose biosynthetic process	None	Extended
BP	GO:2001009	regulation of plant-type cell wall cellulose biosynthetic process	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001843	neural tube closure	IEP	Predict GO terms from Neighborhoods
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006555	methionine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006730	one-carbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009086	methionine biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0031056	regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031060	regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035148	tube formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035999	tetrahydrofolate interconversion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050667	homocysteine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060606	tube closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0070829	obsolete heterochromatin maintenance	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0072341	modified amino acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0106312	methylenetetrahydrofolate reductase NADH activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106313	methylenetetrahydrofolate reductase NADPH activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	126	217
IPR001806	Small_GTPase	8	98
IPR027417	P-loop_NTPase	3	226
IPR005225	Small_GTP-bd_dom	7	97

External Links

No external refs found!

SOLTUB.AGRIA.G00000007980

Expression Profile

Co-expression Networks

Functional Annotation