SOLTUB.AGRIA.G00000008318

Description : Zinc finger (C3HC4-type RING finger) family protein

Gene families : OG_02_0008140 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008318
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_231

Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010197	polar nucleus fusion	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0003002	regionalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003014	renal system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006833	water transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007389	pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007568	aging	IEP	Predict GO terms from Neighborhoods
BP	GO:0007584	response to nutrient	IEP	Predict GO terms from Neighborhoods
BP	GO:0007588	excretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008559	ABC-type xenobiotic transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009637	response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009638	phototropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009717	isoflavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009734	auxin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009785	blue light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009798	axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009880	embryonic pattern specification	IEP	Predict GO terms from Neighborhoods
CC	GO:0009897	external side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009908	flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009914	hormone transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0009942	longitudinal axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010039	response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010148	transpiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010152	pollen maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010184	cytokinin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010222	stem vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010311	lateral root formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010496	intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0014072	response to isoquinoline alkaloid	IEP	Predict GO terms from Neighborhoods
MF	GO:0015143	urate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015225	biotin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015747	urate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015850	organic hydroxy compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015878	biotin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016137	glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016836	hydro-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019389	glucuronoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030522	intracellular receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030638	polyketide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031012	extracellular matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0031253	cell projection membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031526	brush border membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031960	response to corticosteroid	IEP	Predict GO terms from Neighborhoods
MF	GO:0032217	riboflavin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032218	riboflavin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032355	response to estradiol	IEP	Predict GO terms from Neighborhoods
BP	GO:0032496	response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0032868	response to insulin	IEP	Predict GO terms from Neighborhoods
BP	GO:0033273	response to vitamin	IEP	Predict GO terms from Neighborhoods
MF	GO:0033987	2-hydroxyisoflavanone dehydratase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042044	fluid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042542	response to hydrogen peroxide	IEP	Predict GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042886	amide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0043278	response to morphine	IEP	Predict GO terms from Neighborhoods
BP	GO:0043279	response to alkaloid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043434	response to peptide hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0044057	regulation of system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044058	regulation of digestive system process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045121	membrane raft	IEP	Predict GO terms from Neighborhoods
BP	GO:0046287	isoflavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046415	urate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046618	xenobiotic export from cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046864	isoprenoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046865	terpenoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048545	response to steroid hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0051051	negative regulation of transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051180	vitamin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051384	response to glucocorticoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0051593	response to folic acid	IEP	Predict GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060136	embryonic process involved in female pregnancy	IEP	Predict GO terms from Neighborhoods
BP	GO:0060457	negative regulation of digestive system process	IEP	Predict GO terms from Neighborhoods
CC	GO:0070505	pollen coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0070633	transepithelial transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071383	cellular response to steroid hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071384	cellular response to corticosteroid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071385	cellular response to glucocorticoid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071392	cellular response to estradiol stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071396	cellular response to lipid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071407	cellular response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0071483	cellular response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071548	response to dexamethasone	IEP	Predict GO terms from Neighborhoods
BP	GO:0071549	cellular response to dexamethasone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072348	sulfur compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0080110	sporopollenin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080168	abscisic acid transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097254	renal tubular secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0097744	renal urate salt excretion	IEP	Predict GO terms from Neighborhoods
CC	GO:0098552	side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098591	external side of apical plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
CC	GO:0098857	membrane microdomain	IEP	Predict GO terms from Neighborhoods
BP	GO:0140115	export across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0150104	transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901652	response to peptide	IEP	Predict GO terms from Neighborhoods
BP	GO:1901654	response to ketone	IEP	Predict GO terms from Neighborhoods
BP	GO:1901655	cellular response to ketone	IEP	Predict GO terms from Neighborhoods
BP	GO:1901656	glycoside transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904478	regulation of intestinal absorption	IEP	Predict GO terms from Neighborhoods
BP	GO:1904479	negative regulation of intestinal absorption	IEP	Predict GO terms from Neighborhoods
BP	GO:1904612	response to 2,3,7,8-tetrachlorodibenzodioxine	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1990962	xenobiotic transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002035	VWF_A	316	468
IPR001841	Znf_RING	117	146
IPR036465	vWFA_dom_sf	314	473

External Links

No external refs found!

SOLTUB.AGRIA.G00000008318

Expression Profile

Co-expression Networks

Functional Annotation